RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA944406" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA944406 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32869549 32869549 PRJNA944406_P_NODE_12680_length_355_cov_1.638298_g11721_i0 PRJNA944406 12680 355 1.638298 5.8159579 Sclerotinia sclerotiorum negative-stranded RNA virus 7 2231710 Viruses Viruses 59.3 2.15e-7   NR AWY11040.1 2231710 g11721 i0 27.7 1.83380281690141 119 84 98.9 2 3 353 1746 1864 AWY11040.1 RNA-dependent RNA polymerase [Sclerotinia sclerotiorum negative-stranded RNA virus 7] diamond 651 59.3 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Mymonaviridae Sclerotimonavirus Sclerotimonavirus botrytidis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;