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contig_metadata

28 rows where bioproject = "PRJNA944406" and tax_phylum = "Heterolobosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 28 ✖

tax_clade 1

bioproject 1

  • PRJNA944406 · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
924221 924221 PRJNA944406_P_NODE_15441_length_327_cov_1.921260_g14482_i0 PRJNA944406 15441 327 1.92126 6.2825202000000004 Allovahlkampfia sp. S35YCH 2919519 Heterolobosea other_Eukaryota 477 4.279999999999999e-130   NTclustered gi|2199280130|dbj|LC683687.1| 2919519 g14482 i0 93.03 57.2201834862385 330 18 100 4 1 327 187 514 Allovahlkampfia sp. S35YCH gene for 18S ribosomal RNA, partial sequence blastn 18711 477 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. S35YCH
924404 924404 PRJNA944406_P_NODE_3181_length_760_cov_3.698690_g2336_i0 PRJNA944406 3181 760 3.69869 28.110044 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 163 3.38e-35   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g2336 i0 91.597 16.1789473684211 119 8 16 2 17 134 3973 3856 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 12296 163 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
4753475 4753475 PRJNA944406_P_NODE_9224_length_409_cov_4.497024_g8265_i0 PRJNA944406 9224 409 4.497024 18.39282816 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 97.1 1.79e-15   NTclustered gi|2874368068|gb|PQ819792.1| 166956 g8265 i0 88.095 9.82151589242054 84 6 20 3 4 85 475 394 Neovahlkampfia damariscottae strain CCAP:1588/7 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 4017 97.1 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
4753527 4753527 PRJNA944406_P_NODE_97564_length_243_cov_1.811765_g96605_i0 PRJNA944406 97564 243 1.811765 4.40258895 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 52.8 0.022   NTclustered gi|2124404792|ref|XM_044686488.1| 51637 g96605 i0 91.892 0.152263374485597 37 3 15 0 204 240 56 92 Naegleria lovaniensis uncharacterized protein (C9374_010894), partial mRNA blastn 37 52.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
6027359 6027359 PRJNA944406_P_NODE_11345_length_371_cov_2.647651_g10386_i0 PRJNA944406 11345 371 2.647651 9.82278521 Naegleria sp. 37103 Heterolobosea other_Eukaryota 686 0   NTclustered gi|2651357798|gb|PP174311.1| 37103 g10386 i0 100 39.355795148248 371 0 100 0 1 371 3827 3457 Naegleria sp. isolate 33 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14601 686 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp.
6028206 6028206 PRJNA944406_P_NODE_8485_length_428_cov_2.938028_g7528_i0 PRJNA944406 8485 428 2.938028 12.57475984 soil amoeba AND9 328341 Heterolobosea other_Eukaryota 566 1.19e-156   NTclustered gi|65306218|gb|AY965861.1| 328341 g7528 i0 90.867 68.2429906542056 427 31 99 6 2 424 458 36 Soil amoeba AND9 18S ribosomal RNA gene, partial sequence blastn 29208 566 1 Eukaryota Discoba   Heterolobosea         soil amoeba AND9
7302265 7302265 PRJNA944406_P_NODE_11906_length_364_cov_1.896907_g10947_i0 PRJNA944406 11906 364 1.896907 6.90474148 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 435 2.9300000000000003e-117   NTclustered gi|2874368068|gb|PQ819792.1| 166956 g10947 i0 92.691 41.3901098901099 301 22 83 0 64 364 930 1230 Neovahlkampfia damariscottae strain CCAP:1588/7 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 15066 435 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
7637451 7637451 PRJNA944406_P_NODE_17126_length_313_cov_3.066667_g16167_i0 PRJNA944406 17126 313 3.066667 9.59866771 root 1 Root_unresolved Root_unresolved 126 1.7e-24   NTclustered gi|1197711284|ref|NC_034798.1| 63601 g16167 i0 86.325 50.926517571885 117 15 37 1 1 117 19887 19772 Pharyngomonas kirbyi isolate AS12B mitochondrion, complete genome blastn 15940 126 1 Eukaryota Discoba   Heterolobosea       Pharyngomonas Pharyngomonas kirbyi
8577169 8577169 PRJNA944406_P_NODE_15467_length_327_cov_1.299213_g14508_i0 PRJNA944406 15467 327 1.299213 4.24842651 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 195 4.83e-45   NTclustered gi|2874368068|gb|PQ819792.1| 166956 g14508 i0 78.042 2.87767584097859 337 55 99 14 1 326 148 476 Neovahlkampfia damariscottae strain CCAP:1588/7 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 941 195 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
8912234 8912234 PRJNA944406_P_NODE_34507_length_278_cov_1.126829_g33548_i0 PRJNA944406 34507 278 1.126829 3.13258462 Naegleria 5761 Heterolobosea other_Eukaryota 514 2.7199999999999996e-141   NTclustered gi|32479131|gb|AY321362.1| 51634 g33548 i0 100 99.9820143884892 278 0 100 0 1 278 1156 879 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 27795 514 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
9852227 9852227 PRJNA944406_P_NODE_12748_length_354_cov_3.548043_g11789_i0 PRJNA944406 12748 354 3.548043 12.56007222 soil amoeba AND9 328341 Heterolobosea other_Eukaryota 503 7.689999999999998e-138   NTclustered gi|65306218|gb|AY965861.1| 328341 g11789 i0 92.373 86.8248587570621 354 26 100 1 1 354 1321 969 Soil amoeba AND9 18S ribosomal RNA gene, partial sequence blastn 30736 503 1 Eukaryota Discoba   Heterolobosea         soil amoeba AND9
9852980 9852980 PRJNA944406_P_NODE_83548_length_247_cov_0.885057_g82589_i0 PRJNA944406 83548 247 0.885057 2.18609079 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 379 9.02e-101   NTclustered gi|290972105|ref|XM_002668755.1| 5762 g82589 i0 94.332 1 247 14 100 0 1 247 1509 1263 Naegleria gruberi long-chain-fatty-acid--CoA ligase (NAEGRDRAFT_82307), mRNA blastn 247 379 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11463268 11463268 PRJNA944406_P_NODE_41809_length_271_cov_1.272727_g40850_i0 PRJNA944406 41809 271 1.272727 3.44909017 Naegleria 5761 Heterolobosea other_Eukaryota 62.1 4.13e-5   NTclustered gi|2031946985|emb|OD958550.1| 5763 g40850 i0 100 11.7269372693727 33 0 12 0 157 189 4325 4357 Naegleria fowleri Karachi_NF001 strain blastn 3178 62.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
12403327 12403327 PRJNA944406_P_NODE_10970_length_377_cov_1.069079_g10011_i0 PRJNA944406 10970 377 1.069079 4.03042783 soil amoeba AND9 328341 Heterolobosea other_Eukaryota 566 1.04e-156   NTclustered gi|65306218|gb|AY965861.1| 328341 g10011 i0 93.701 69.9867374005305 381 19 100 4 1 377 56 435 Soil amoeba AND9 18S ribosomal RNA gene, partial sequence blastn 26385 566 1 Eukaryota Discoba   Heterolobosea         soil amoeba AND9
13677932 13677932 PRJNA944406_P_NODE_17411_length_311_cov_1.537815_g16452_i0 PRJNA944406 17411 311 1.537815 4.78260465 Allovahlkampfia sp. PKD 2011b 1217111 Heterolobosea other_Eukaryota 412 1.1599999999999999e-110   NTclustered gi|399764159|gb|JQ271670.1| 1217111 g16452 i0 91.148 34.9260450160772 305 25 97 2 9 311 2181 2485 Allovahlkampfia sp. PKD 2011b strain PV66 18S ribosomal RNA gene, partial sequence blastn 10862 412 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011b
13678800 13678800 PRJNA944406_P_NODE_9331_length_407_cov_1.793413_g8372_i0 PRJNA944406 9331 407 1.793413 7.29919091 Vahlkampfia sp. 1874882 Heterolobosea other_Eukaryota 128 6.31e-25   NTclustered gi|2651357786|gb|PP174301.1| 1874882 g8372 i0 86.441 5.7960687960688 118 14 29 2 19 135 3973 3857 Vahlkampfia sp. isolate 24M small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2359 128 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia sp.
17502465 17502465 PRJNA944406_P_NODE_16814_length_316_cov_1.156379_g15855_i0 PRJNA944406 16814 316 1.156379 3.65415764 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 151 2.96e-44   NR CAG4714041.1 5763 g15855 i0 71 12.8639240506329 107 29 99.7 1 1 315 1 107 CAG4714041.1 unnamed protein product, partial [Naegleria fowleri] diamond 4065 152 0.993421052631579 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
17502540 17502540 PRJNA944406_P_NODE_24054_length_288_cov_1.139535_g23095_i0 PRJNA944406 24054 288 1.139535 3.2818608 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 390 4.969999999999999e-104   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g23095 i0 95.142 54.1597222222222 247 12 86 0 41 287 3152 3398 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 15598 390 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
18776254 18776254 PRJNA944406_P_NODE_3835_length_681_cov_2.845395_g2947_i0 PRJNA944406 3835 681 2.845395 19.37713995 Neovahlkampfia damariscottae 166956 Heterolobosea other_Eukaryota 409 3.5e-109   NTclustered gi|2874368068|gb|PQ819792.1| 166956 g2947 i0 84.798 55.8017621145374 421 48 75 9 262 679 934 1341 Neovahlkampfia damariscottae strain CCAP:1588/7 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 38001 409 1 Eukaryota Discoba   Heterolobosea     Neovahlkampfiidae Neovahlkampfia Neovahlkampfia damariscottae
23877065 23877065 PRJNA944406_P_NODE_36159_length_276_cov_1.517241_g35200_i0 PRJNA944406 36159 276 1.517241 4.18758516 uncultured heterolobosean 352378 Heterolobosea other_Eukaryota 84.2 9e-12   NTclustered gi|95115861|gb|DQ504339.1| 352378 g35200 i0 94.444 0.550724637681159 54 3 20 0 1 54 583 636 Uncultured heterolobosean clone LC103_5EP_3 18S ribosomal RNA gene, partial sequence blastn 152 84.2 1 Eukaryota Discoba   Heterolobosea         uncultured heterolobosean
24210944 24210944 PRJNA944406_P_NODE_16859_length_315_cov_4.371901_g15900_i0 PRJNA944406 16859 315 4.371901 13.77148815 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 577 3.9299999999999986e-160   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g15900 i0 99.683 93.9015873015873 315 1 100 0 1 315 1721 2035 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 29579 577 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
25486174 25486174 PRJNA944406_P_NODE_8500_length_428_cov_1.301408_g7543_i0 PRJNA944406 8500 428 1.301408 5.57002624 Naegleria 5761 Heterolobosea other_Eukaryota 143 2.38e-29   NTclustered gi|2618963742|gb|OR769034.1| 5762 g7543 i0 81.765 47.1682242990654 170 31 40 0 89 258 5226 5057 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 20188 143 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27095260 27095260 PRJNA944406_P_NODE_11602_length_368_cov_1.305085_g10643_i0 PRJNA944406 11602 368 1.305085 4.8027128 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 105 1.7699999999999998e-23   NR XP_002672763.1 5762 g10643 i0 54.9 2.66576086956522 82 37 66.8 0 365 120 465 546 XP_002672763.1 uncharacterized protein NAEGRDRAFT_72167 [Naegleria gruberi] diamond 981 106 0.990566037735849 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
27151350 27151350 PRJNA944406_P_NODE_94882_length_244_cov_0.900585_g93923_i0 PRJNA944406 94882 244 0.900585 2.1974274 Acrasis kona 1008807 Heterolobosea other_Eukaryota 129 7.41e-35   NR KAL0485674.1 1008807 g93923 i0 76.3 0.983606557377049 80 19 98.4 0 242 3 152 231 KAL0485674.1 kelch-like protein [Acrasis kona] diamond 240 129 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27594166 27594166 PRJNA944406_P_NODE_37584_length_275_cov_1.217822_g36625_i0 PRJNA944406 37584 275 1.217822 3.3490105 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 46.2 0.00315   NR XP_044563266.1 5763 g36625 i0 47.3 0.6 55 29 60 0 2 166 193 247 XP_044563266.1 uncharacterized protein FDP41_002373 [Naegleria fowleri] diamond 165 46.2 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
27720833 27720833 PRJNA944406_P_NODE_77224_length_248_cov_0.880000_g76265_i0 PRJNA944406 77224 248 0.88 2.1824 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 67.8 6.04e-11   NR XP_002673976.1 5762 g76265 i0 69.1 0.82258064516129 68 14 76.2 4 60 248 463 528 XP_002673976.1 uncharacterized protein NAEGRDRAFT_70914 [Naegleria gruberi] diamond 204 67.8 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28674376 28674376 PRJNA944406_P_NODE_32847_length_279_cov_1.495146_g31888_i0 PRJNA944406 32847 279 1.495146 4.17145734 Naegleria 5761 Heterolobosea other_Eukaryota 48.1 7.18e-4   NR XP_002672825.1 5762 g31888 i0 44.1 1.90322580645161 59 33 63.4 0 278 102 657 715 XP_002672825.1 Band_7_stomatin_like domain-containing protein [Naegleria gruberi] diamond 531 48.1 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28856803 28856803 PRJNA944406_P_NODE_19728_length_297_cov_1.031250_g18769_i0 PRJNA944406 19728 297 1.03125 3.0628125 Acrasis kona 1008807 Heterolobosea other_Eukaryota 102 9.79e-25   NR KAL0483597.1 1008807 g18769 i0 54.9 1.65656565656566 82 37 82.8 0 247 2 12 93 KAL0483597.1 actin-related protein 2/3 complex subunit 3 [Acrasis kona] diamond 492 102 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;