RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA944406" and tax_phylum = "Candidatus Micrarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Micrarchaeota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA944406 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25151104 25151104 PRJNA944406_P_NODE_74220_length_249_cov_0.875000_g73261_i0 PRJNA944406 74220 249 0.875 2.17875 Candidatus Mancarchaeum acidiphilum 1920749 Archaea Archaea 84.2 7.99e-12   NTclustered gi|1214173074|gb|CP019964.1| 1920749 g73261 i0 89.552 2.95983935742972 67 5 27 2 12 77 842896 842961 Candidatus Mancarchaeum acidiphilum strain Mia14 chromosome, complete genome blastn 737 84.2 1 Archaea   Nanobdellati Candidatus Micrarchaeota       Candidatus Mancarchaeum Candidatus Mancarchaeum acidiphilum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;