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contig_metadata

20 rows where bioproject = "PRJNA944406", tax_kingdom = "Orthornavirae" and tax_phylum = "Kitrinoviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Kitrinoviricota · 20 ✖

tax_kingdom 1

  • Orthornavirae · 20 ✖

bioproject 1

  • PRJNA944406 · 20 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2199627 2199627 PRJNA944406_P_NODE_1862_length_1024_cov_2.683491_g1215_i0 PRJNA944406 1862 1024 2.683491 27.47894784 Galium odoratum potexvirus 2738917 Viruses Viruses 773 0   NTclustered gi|1845309154|gb|MN814316.1| 2738917 g1215 i0 80.483 17.953125 1035 180 100 15 1 1024 618 1641 Galium odoratum potexvirus strain pt040-lat-5, complete genome blastn 18384 773 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Galium odoratum potexvirus
3475031 3475031 PRJNA944406_P_NODE_18763_length_303_cov_2.356522_g17804_i0 PRJNA944406 18763 303 2.356522 7.14026166 Bromovirus BMV 3427622 Viruses Viruses 532 8.269999999999998e-147   NTclustered gi|2204717160|gb|MZ504791.1| 12302 g17804 i0 98.35 40.4488448844885 303 5 100 0 1 303 1857 1555 Brome mosaic virus isolate BMV-MJ segment RNA3, complete sequence blastn 12256 532 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Bromovirus Bromovirus BMV
4752665 4752665 PRJNA944406_P_NODE_20164_length_294_cov_1.714932_g19205_i0 PRJNA944406 20164 294 1.714932 5.04190008 Carlavirus latensgaillardiae 3427768 Viruses Viruses 466 8.22e-127   NTclustered gi|1842103655|dbj|LC485538.1| 1468172 g19205 i0 95.238 2.98639455782313 294 14 100 0 1 294 266 559 Gaillardia latent virus Vf1 genomic RNA, nearly complete genome blastn 878 466 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensgaillardiae
7302242 7302242 PRJNA944406_P_NODE_112626_length_228_cov_3.974194_g111667_i0 PRJNA944406 112626 228 3.974194 9.06116232 Bromovirus BMV 3427622 Viruses Viruses 374 3.8199999999999984e-99   NTclustered gi|2214792971|gb|MW581056.1| 12302 g111667 i0 96.46 33.7105263157895 226 8 99 0 1 226 1974 2199 Brome mosaic virus isolate BMV-Ch4 RdRp polymerase gene, complete cds blastn 7686 374 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Bromovirus Bromovirus BMV
7302681 7302681 PRJNA944406_P_NODE_48646_length_264_cov_1.952880_g47687_i0 PRJNA944406 48646 264 1.95288 5.1556032 Panicovirus dactylis 3047766 Viruses Viruses 346 9.880000000000002e-91   NTclustered gi|195546694|ref|NC_011108.1| 479060 g47687 i0 90.226 3.01893939393939 266 24 100 1 1 264 1361 1096 Cocksfoot mild mosaic virus, complete genome blastn 797 346 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae Panicovirus Panicovirus dactylis
8577686 8577686 PRJNA944406_P_NODE_6247_length_513_cov_1.961364_g5292_i0 PRJNA944406 6247 513 1.961364 10.06179732 Potexvirus trifolii 3433859 Viruses Viruses 542 2.44e-149   NTclustered gi|2520252303|gb|OQ993368.1| 12188 g5292 i0 85.855 3.93567251461988 509 72 99 0 5 513 3268 2760 White clover mosaic virus isolate DSMZ PV-1074, complete genome blastn 2019 542 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
14952162 14952162 PRJNA944406_P_NODE_12592_length_356_cov_1.614841_g11633_i0 PRJNA944406 12592 356 1.614841 5.74883396 Potexvirus trifolii 3433859 Viruses Viruses 390 6.289999999999999e-104   NTclustered gi|1036484819|dbj|LC159490.1| 12188 g11633 i0 87.353 14.0898876404494 340 43 96 0 15 354 4167 3828 White clover mosaic virus genomic RNA, complete genome, strain: RC, isolate: Cheongdo-2 blastn 5016 390 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
17502693 17502693 PRJNA944406_P_NODE_35894_length_276_cov_1.517241_g34935_i0 PRJNA944406 35894 276 1.517241 4.18758516 Bromovirus BMV 3427622 Viruses Viruses 510 3.48e-140   NTclustered gi|2239525832|gb|MW568008.1| 12302 g34935 i0 100 37.9927536231884 276 0 100 0 1 276 1554 1279 Brome mosaic virus isolate BMV-N replication-associated protein gene, complete cds blastn 10486 510 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Bromovirus Bromovirus BMV
18776292 18776292 PRJNA944406_P_NODE_4115_length_652_cov_2.749568_g3209_i0 PRJNA944406 4115 652 2.749568 17.92718336 Potexvirus trifolii 3433859 Viruses Viruses 896 0   NTclustered gi|2792601926|gb|PQ162444.1| 12188 g3209 i0 91.538 22.5843558282209 650 55 99 0 3 652 15 664 White clover mosaic virus isolate DSMZ PV-1407, complete genome blastn 14725 896 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
20050840 20050840 PRJNA944406_P_NODE_11796_length_366_cov_0.989761_g10837_i0 PRJNA944406 11796 366 0.989761 3.62252526 Skokie tombus-like virus 2789423 Viruses Viruses 632 9.759999999999998e-177   NTclustered gi|1935607036|gb|MT747993.1| 2789423 g10837 i0 97.814 1.99726775956284 366 8 100 0 1 366 106 471 Skokie tombus-like virus strain USAdp-1 RNA-dependent RNA polymerase gene, complete cds blastn 731 632 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Skokie tombus-like virus
20051123 20051123 PRJNA944406_P_NODE_3756_length_690_cov_2.382496_g2871_i0 PRJNA944406 3756 690 2.382496 16.4392224 Skokie tombus-like virus 2789423 Viruses Viruses 1175 0   NTclustered gi|1933757594|gb|MW177751.1| 2789423 g2871 i0 97.391 1 690 18 100 0 1 690 699 10 Skokie tombus-like virus strain USAdp coat protein gene, partial cds blastn 690 1175 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Skokie tombus-like virus
21326451 21326451 PRJNA944406_P_NODE_2337_length_912_cov_2.507747_g1599_i0 PRJNA944406 2337 912 2.507747 22.87065264 Potexvirus trifolii 3433859 Viruses Viruses 756 0   NTclustered gi|1843793417|gb|MN399741.1| 12188 g1599 i0 81.749 6.24451754385965 915 157 99 9 2 911 5163 4254 White clover mosaic virus isolate Kreis Stormarn_17 RNA replication protein, triple gene block protein 1, triple gene block protein 2, triple gene block protein 3, and coat protein genes, complete cds blastn 5695 756 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
21326764 21326764 PRJNA944406_P_NODE_48977_length_264_cov_1.591623_g48018_i0 PRJNA944406 48977 264 1.591623 4.20188472 Ripothoz virus 3131336 Viruses Viruses 224 4.8299999999999996e-54   NTclustered gi|2717322249|gb|PP173638.1| 3131336 g48018 i0 82.397 40.3977272727273 267 37 100 8 1 264 5326 5585 MAG: Ripothoz virus isolate MP3_k141_314104 genomic sequence blastn 10665 224 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Ripothoz virus
24211029 24211029 PRJNA944406_P_NODE_4279_length_639_cov_1.196113_g3367_i0 PRJNA944406 4279 639 1.196113 7.64316207 Viruses 10239 Viruses Viruses 1061 0   NTclustered gi|1933757591|gb|MW177750.1| 2789423 g3367 i0 96.703 1.99687010954617 637 21 99 0 1 637 982 346 Skokie tombus-like virus strain USAdp hypothetical protein 2 gene, partial cds blastn 1276 1064 0.99718045112781994 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Skokie tombus-like virus
26898861 26898861 PRJNA944406_P_NODE_49401_length_264_cov_1.209424_g48442_i0 PRJNA944406 49401 264 1.209424 3.19287936 White clover mosaic virus 12188 Viruses Viruses 175 1.1399999999999999e-48   NR NP_620715.1 12188 g48442 i0 98.9 0.988636363636364 87 1 98.9 0 262 2 1110 1196 NP_620715.1 RNA replication protein [White clover mosaic virus] diamond 261 175 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
27720820 27720820 PRJNA944406_P_NODE_6064_length_521_cov_2.406250_g5111_i0 PRJNA944406 6064 521 2.40625 12.5365625 White clover mosaic virus 12188 Viruses Viruses 336 1.8399999999999998e-104   NR NP_620715.1 12188 g5111 i0 95.4 0.99616122840691 173 8 99.6 0 519 1 723 895 NP_620715.1 RNA replication protein [White clover mosaic virus] diamond 519 336 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus trifolii
29937399 29937399 PRJNA944406_P_NODE_34431_length_278_cov_1.195122_g33472_i0 PRJNA944406 34431 278 1.195122 3.32243916 Deltaflexivirus 2169569 Viruses Viruses 118 1.79e-28   NR QKN22675.1 2743100 g33472 i0 67 3.91726618705036 88 29 95 0 11 274 199 286 QKN22675.1 RNA-dependent RNA polymerase [Erysiphe necator associated flexivirus 3] diamond 1089 118 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Erysiphe necator associated flexivirus 3
30341802 30341802 PRJNA944406_P_NODE_112032_length_232_cov_2.358491_g111073_i0 PRJNA944406 112032 232 2.358491 5.47169912 Leptosphaeria biglobosa deltaflexivirus 2 2985705 Viruses Viruses 102 4.5e-23   NR UYL94495.1 2985705 g111073 i0 65.3 0.969827586206897 75 26 97 0 231 7 1503 1577 UYL94495.1 MAG: RNA-dependent RNA polymerase [Leptosphaeria biglobosa deltaflexivirus 2] diamond 225 102 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Leptosphaeria biglobosa deltaflexivirus 2
30815181 30815181 PRJNA944406_P_NODE_30694_length_281_cov_1.480769_g29735_i0 PRJNA944406 30694 281 1.480769 4.16096089 Grapevine-associated tymo-like virus 1 2814377 Viruses Viruses 141 1.09e-36   NR QXN75447.1 2814377 g29735 i0 64.1 2.91459074733096 92 33 98.2 0 280 5 559 650 QXN75447.1 MAG: RNA-dependent RNA polymerase [Grapevine-associated tymo-like virus 1] diamond 819 141 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales     Grapevine-associated tymo-like virus 1
31194005 31194005 PRJNA944406_P_NODE_83775_length_247_cov_0.885057_g82816_i0 PRJNA944406 83775 247 0.885057 2.18609079 Leptosphaeria biglobosa deltaflexivirus 2 2985705 Viruses Viruses 154 2.319999999999999e-41   NR UYL94495.1 2985705 g82816 i0 92.6 0.983805668016194 81 6 98.4 0 245 3 1379 1459 UYL94495.1 MAG: RNA-dependent RNA polymerase [Leptosphaeria biglobosa deltaflexivirus 2] diamond 243 154 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Leptosphaeria biglobosa deltaflexivirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;