RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

5 rows where bioproject = "PRJNA944406", tax_kingdom = "Nanobdellati" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Archaea · 5 ✖

tax_kingdom 1

  • Nanobdellati · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA944406 · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25151104 25151104 PRJNA944406_P_NODE_74220_length_249_cov_0.875000_g73261_i0 PRJNA944406 74220 249 0.875 2.17875 Candidatus Mancarchaeum acidiphilum 1920749 Archaea Archaea 84.2 7.99e-12   NTclustered gi|1214173074|gb|CP019964.1| 1920749 g73261 i0 89.552 2.95983935742972 67 5 27 2 12 77 842896 842961 Candidatus Mancarchaeum acidiphilum strain Mia14 chromosome, complete genome blastn 737 84.2 1 Archaea   Nanobdellati Candidatus Micrarchaeota       Candidatus Mancarchaeum Candidatus Mancarchaeum acidiphilum
30000639 30000639 PRJNA944406_P_NODE_32751_length_279_cov_1.495146_g31792_i0 PRJNA944406 32751 279 1.495146 4.17145734 root 1 Root_unresolved Root_unresolved 124 1.62e-30   NR MCK5604065.1 2026773 g31792 i0 61.5 6.8494623655914 91 35 97.8 0 6 278 657 747 MCK5604065.1 phenylalanine--tRNA ligase subunit beta [Candidatus Pacearchaeota archaeon] diamond 1911 125 0.992 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30032186 30032186 PRJNA944406_P_NODE_24251_length_287_cov_2.149533_g23292_i0 PRJNA944406 24251 287 2.149533 6.16915971 root 1 Root_unresolved Root_unresolved 80.9 2.46e-15   NR MEK6880092.1 2026764 g23292 i0 41.8 2.04878048780488 98 54 99.3 1 1 285 539 636 MEK6880092.1 bifunctional DNA primase/polymerase [Nanoarchaeota archaeon] diamond 588 81.6 0.991421568627451 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
32712124 32712124 PRJNA944406_P_NODE_37000_length_275_cov_1.524752_g36041_i0 PRJNA944406 37000 275 1.524752 4.193068 Candidatus Woesearchaeota archaeon 2026803 Archaea Archaea 72 1.01e-12   NR MBS3133084.1 2026803 g36041 i0 50.8 0.643636363636364 59 28 63.3 1 8 181 198 256 MBS3133084.1 glycerophosphodiester phosphodiesterase [Candidatus Woesearchaeota archaeon] diamond 177 72 1 Archaea   Nanobdellati Candidatus Woesearchaeota         Candidatus Woesearchaeota archaeon
32900939 32900939 PRJNA944406_P_NODE_49220_length_264_cov_1.356021_g48261_i0 PRJNA944406 49220 264 1.356021 3.57989544 Candidatus Iainarchaeum archaeon 3101447 Archaea Archaea 77 2.24e-14   NR MCK4884408.1 2026736 g48261 i0 44.9 0.886363636363636 78 43 88.6 0 263 30 186 263 MCK4884408.1 hypothetical protein [Candidatus Iainarchaeum archaeon] diamond 234 77 1 Archaea   Nanobdellati Candidatus Iainarchaeota       Candidatus Iainarchaeum Candidatus Iainarchaeum archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;