contig_metadata
20 rows where bioproject = "PRJNA944406", tax_clade = "delta/epsilon subdivisions" and tax_superkingdom = "Bacteria"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 924390 | 924390 | PRJNA944406_P_NODE_3061_length_778_cov_2.536170_g2235_i0 | PRJNA944406 | 3061 | 778 | 2.53617 | 19.7314026 | uncultured delta proteobacterium HF0070_10I02 | 710824 | Bacteria | Bacteria | 658 | 0 | NTclustered | gi|297181000|gb|GU474857.1| | 710824 | g2235 | i0 | 82.278 | 137.188946015424 | 790 | 113 | 99 | 21 | 1 | 775 | 7056 | 7833 | Uncultured delta proteobacterium HF0070_10I02 genomic sequence | blastn | 106733 | 658 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium HF0070_10I02 | ||||||
| 3475348 | 3475348 | PRJNA944406_P_NODE_48343_length_265_cov_1.197917_g47384_i0 | PRJNA944406 | 48343 | 265 | 1.197917 | 3.17448005 | uncultured delta proteobacterium DeepAnt-1F12 | 357894 | Bacteria | Bacteria | 287 | 6.099999999999999e-73 | NTclustered | gi|82617822|gb|DQ267495.1| | 357894 | g47384 | i0 | 86.923 | 196.894339622641 | 260 | 29 | 97 | 4 | 1 | 257 | 4685 | 4942 | Uncultured delta proteobacterium DeepAnt-1F12 fosmid, complete sequence | blastn | 52177 | 287 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium DeepAnt-1F12 | ||||||
| 3811596 | 3811596 | PRJNA944406_P_NODE_7503_length_458_cov_4.490909_g6547_i0 | PRJNA944406 | 7503 | 458 | 4.490909 | 20.56836322 | Bacteria | 2 | Bacteria | Bacteria | 697 | 0 | NTclustered | gi|511202455|gb|KC994686.1| | 34034 | g6547 | i0 | 96.037 | 87.4126637554585 | 429 | 15 | 93 | 2 | 1 | 428 | 9 | 436 | Uncultured delta proteobacterium clone BF 006 16S ribosomal RNA gene, partial sequence | blastn | 40035 | 704 | 0.990056818181818 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 6027682 | 6027682 | PRJNA944406_P_NODE_39285_length_273_cov_1.540000_g38326_i0 | PRJNA944406 | 39285 | 273 | 1.54 | 4.2042 | Microvenator marinus | 2600177 | Bacteria | Bacteria | 161 | 3.99e-35 | NTclustered | gi|1722470586|gb|CP042467.1| | 2600177 | g38326 | i0 | 87.234 | 79.6483516483516 | 141 | 18 | 52 | 0 | 133 | 273 | 703078 | 703218 | Microvenator marinus strain V1718 chromosome, complete genome | blastn | 21744 | 161 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Bradymonadales | Microvenatoraceae | Microvenator | Microvenator marinus | |||
| 6028098 | 6028098 | PRJNA944406_P_NODE_75445_length_248_cov_2.634286_g74486_i0 | PRJNA944406 | 75445 | 248 | 2.634286 | 6.53302928 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 60.2 | 1.34e-4 | NTclustered | gi|2259418016|emb|OW933748.1| | 34034 | g74486 | i0 | 97.143 | 0.141129032258065 | 35 | 1 | 14 | 0 | 151 | 185 | 317 | 283 | uncultured delta proteobacterium DNA containing 16S-23S intergenic spacer region, clone 43 | blastn | 35 | 60.2 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 7637593 | 7637593 | PRJNA944406_P_NODE_56866_length_257_cov_1.255435_g55907_i0 | PRJNA944406 | 56866 | 257 | 1.255435 | 3.22646795 | Bacteria | 2 | Bacteria | Bacteria | 470 | 5.45e-128 | NTclustered | gi|237757531|gb|FJ946330.1| | 34034 | g55907 | i0 | 99.611 | 99.9922178988327 | 257 | 1 | 100 | 0 | 1 | 257 | 188 | 444 | Uncultured delta proteobacterium clone H-34-E 16S ribosomal RNA gene, partial sequence | blastn | 25698 | 470 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 9852447 | 9852447 | PRJNA944406_P_NODE_2968_length_795_cov_2.022161_g2144_i0 | PRJNA944406 | 2968 | 795 | 2.022161 | 16.07617995 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 765 | 0 | NTclustered | gi|374854163|dbj|AP011765.1| | 34034 | g2144 | i0 | 84.105 | 109.568553459119 | 799 | 119 | 100 | 6 | 1 | 795 | 13061 | 13855 | Uncultured delta proteobacterium DNA, fosmid clone: JFF046_H12 | blastn | 87107 | 765 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 12403550 | 12403550 | PRJNA944406_P_NODE_30270_length_282_cov_1.119617_g29311_i0 | PRJNA944406 | 30270 | 282 | 1.119617 | 3.15731994 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 472 | 1.6799999999999998e-128 | NTclustered | gi|110813894|gb|DQ676326.1| | 34034 | g29311 | i0 | 96.82 | 96.436170212766 | 283 | 7 | 100 | 2 | 1 | 282 | 565 | 284 | Uncultured delta proteobacterium clone MVS-27 16S ribosomal RNA gene, partial sequence | blastn | 27195 | 472 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 12403584 | 12403584 | PRJNA944406_P_NODE_32950_length_279_cov_1.495146_g31991_i0 | PRJNA944406 | 32950 | 279 | 1.495146 | 4.17145734 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 154 | 6.850000000000001e-33 | NTclustered | gi|2874254016|emb|OY970341.1| | 34034 | g31991 | i0 | 94.059 | 218.26523297491 | 101 | 6 | 36 | 0 | 50 | 150 | 592693 | 592593 | MAG: uncultured delta proteobacterium isolate MFD01231.bin.c.2 genome assembly, chromosome: 1 | blastn | 60896 | 154 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 12404059 | 12404059 | PRJNA944406_P_NODE_7850_length_448_cov_1.402667_g6893_i0 | PRJNA944406 | 7850 | 448 | 1.402667 | 6.28394816 | uncultured delta proteobacterium DeepAnt-32C6 | 357895 | Bacteria | Bacteria | 656 | 0 | NTclustered | gi|82617838|gb|DQ267496.1| | 357895 | g6893 | i0 | 93.439 | 200.872767857143 | 442 | 29 | 99 | 0 | 1 | 442 | 3696 | 3255 | Uncultured delta proteobacterium DeepAnt-32C6 fosmid, complete sequence | blastn | 89991 | 656 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium DeepAnt-32C6 | ||||||
| 12738748 | 12738748 | PRJNA944406_P_NODE_18810_length_303_cov_1.339130_g17851_i0 | PRJNA944406 | 18810 | 303 | 1.33913 | 4.0575639 | Bacteria | 2 | Bacteria | Bacteria | 521 | 1.7899999999999994e-143 | NTclustered | gi|339646371|gb|JN038760.1| | 34034 | g17851 | i0 | 97.69 | 98.3267326732673 | 303 | 7 | 100 | 0 | 1 | 303 | 306 | 4 | Uncultured delta proteobacterium clone MP-R91 16S ribosomal RNA gene, partial sequence | blastn | 29793 | 521 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 13678298 | 13678298 | PRJNA944406_P_NODE_4831_length_594_cov_1.856046_g3895_i0 | PRJNA944406 | 4831 | 594 | 1.856046 | 11.02491324 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 549 | 1.7099999999999994e-151 | NTclustered | gi|2874253888|emb|OY970063.1| | 34034 | g3895 | i0 | 84.283 | 207.592592592593 | 579 | 74 | 96 | 14 | 1 | 571 | 628849 | 628280 | MAG: uncultured delta proteobacterium isolate MFD10007.bin.1.119 genome assembly, chromosome: 1 | blastn | 123310 | 549 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 16227191 | 16227191 | PRJNA944406_P_NODE_16653_length_317_cov_1.262295_g15694_i0 | PRJNA944406 | 16653 | 317 | 1.262295 | 4.00147515 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 520 | 6.769999999999999e-143 | NTclustered | gi|375153257|gb|JN634103.1| | 34034 | g15694 | i0 | 96.795 | 99.9116719242902 | 312 | 8 | 98 | 2 | 7 | 317 | 508 | 198 | Uncultured delta proteobacterium clone HM170 16S ribosomal RNA gene, partial sequence | blastn | 31672 | 520 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 17502655 | 17502655 | PRJNA944406_P_NODE_32894_length_279_cov_1.495146_g31935_i0 | PRJNA944406 | 32894 | 279 | 1.495146 | 4.17145734 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 261 | 3.92e-65 | NTclustered | gi|2874253999|emb|OY970324.1| | 34034 | g31935 | i0 | 83.746 | 306.716845878136 | 283 | 38 | 100 | 7 | 1 | 279 | 83423 | 83701 | MAG: uncultured delta proteobacterium isolate MFD05502.bin.1.132 genome assembly, chromosome: 1 | blastn | 85574 | 261 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 21326295 | 21326295 | PRJNA944406_P_NODE_110557_length_239_cov_3.030120_g109598_i0 | PRJNA944406 | 110557 | 239 | 3.03012 | 7.2419868 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 62.1 | 3.57e-5 | NTclustered | gi|2874254016|emb|OY970341.1| | 34034 | g109598 | i0 | 97.222 | 1.11297071129707 | 36 | 1 | 15 | 0 | 140 | 175 | 3607041 | 3607006 | MAG: uncultured delta proteobacterium isolate MFD01231.bin.c.2 genome assembly, chromosome: 1 | blastn | 266 | 62.1 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium | ||||||
| 26772157 | 26772157 | PRJNA944406_P_NODE_77021_length_248_cov_0.880000_g76062_i0 | PRJNA944406 | 77021 | 248 | 0.88 | 2.1824 | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-16 | 2013743 | Bacteria | Bacteria | 56.2 | 3.36e-7 | NR | PKN50115.1 | 2013743 | g76062 | i0 | 38.9 | 1.82661290322581 | 72 | 44 | 87.1 | 0 | 4 | 219 | 129 | 200 | PKN50115.1 MAG: hypothetical protein CVU58_02220 [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-16] | diamond | 453 | 56.2 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-16 | ||||||
| 27689192 | 27689192 | PRJNA944406_P_NODE_98904_length_243_cov_0.905882_g97945_i0 | PRJNA944406 | 98904 | 243 | 0.905882 | 2.20129326 | Deltaproteobacteria bacterium 13_1_4 | 2026735 | Bacteria | Bacteria | 53.9 | 2.13e-6 | NR | OLC17741.1 | 1805123 | g97945 | i0 | 46.6 | 2.96296296296296 | 58 | 28 | 71.6 | 2 | 1 | 174 | 67 | 121 | OLC17741.1 MAG: hypothetical protein AUH38_05190 [Deltaproteobacteria bacterium 13_1_40CM_68_24] | diamond | 720 | 53.9 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium 13_1_40CM_68_24 | ||||||
| 28383318 | 28383318 | PRJNA944406_P_NODE_109386_length_241_cov_0.916667_g108427_i0 | PRJNA944406 | 109386 | 241 | 0.916667 | 2.20916747 | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14 | 2013741 | Bacteria | Bacteria | 75.5 | 1.09e-13 | NR | PKN58898.1 | 2013741 | g108427 | i0 | 48.8 | 0.995850622406639 | 80 | 40 | 98.3 | 1 | 241 | 5 | 67 | 146 | PKN58898.1 MAG: hypothetical protein CVU56_03490, partial [Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14] | diamond | 240 | 75.5 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Deltaproteobacteria bacterium HGW-Deltaproteobacteria-14 | ||||||
| 30056794 | 30056794 | PRJNA944406_P_NODE_78351_length_248_cov_0.880000_g77392_i0 | PRJNA944406 | 78351 | 248 | 0.88 | 2.1824 | Olavius algarvensis Delta 1 endosymbiont | 334747 | Bacteria | Bacteria | 42.7 | 0.0372 | NR | CAB1083418.1 | 334747 | g77392 | i0 | 31.8 | 0.798387096774194 | 66 | 41 | 75 | 1 | 45 | 230 | 234 | 299 | CAB1083418.1 hypothetical protein D1AOALGA4SA_10986 [Olavius algarvensis Delta 1 endosymbiont] | diamond | 198 | 42.7 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | Olavius algarvensis Delta 1 endosymbiont | ||||||
| 31099441 | 31099441 | PRJNA944406_P_NODE_77055_length_248_cov_0.880000_g76096_i0 | PRJNA944406 | 77055 | 248 | 0.88 | 2.1824 | uncultured delta proteobacterium | 34034 | Bacteria | Bacteria | 64.7 | 1.13e-10 | NR | BAL57075.1 | 34034 | g76096 | i0 | 78.4 | 0.44758064516129 | 37 | 8 | 44.8 | 0 | 248 | 138 | 133 | 169 | BAL57075.1 hypothetical conserved protein [uncultured delta proteobacterium] | diamond | 111 | 64.7 | 1 | Bacteria | delta/epsilon subdivisions | Deltaproteobacteria | uncultured delta proteobacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;