RNAquarium Metadata Server
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contig_metadata

12 rows where bioproject = "PRJNA944406", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 12 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 12 ✖

bioproject 1

  • PRJNA944406 · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3474872 3474872 PRJNA944406_P_NODE_107123_length_241_cov_0.916667_g106164_i0 PRJNA944406 107123 241 0.916667 2.20916747 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 211 3.38e-50   NTclustered gi|551565063|ref|XM_005768979.1| 280463 g106164 i0 82.645 11.5643153526971 242 38 99 4 1 240 344 583 Emiliania huxleyi CCMP1516 hypothetical protein mRNA blastn 2787 211 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
8577010 8577010 PRJNA944406_P_NODE_101307_length_243_cov_0.905882_g100348_i0 PRJNA944406 101307 243 0.905882 2.20129326 Emiliania huxleyi 2903 Haptophyta other_Eukaryota 150 7.55e-32   NTclustered gi|551562710|ref|XM_005768053.1| 280463 g100348 i0 85.034 5.67901234567901 147 22 60 0 77 223 247 393 Emiliania huxleyi CCMP1516 hypothetical protein partial mRNA blastn 1380 150 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
22601337 22601337 PRJNA944406_P_NODE_18278_length_307_cov_1.311966_g17319_i0 PRJNA944406 18278 307 1.311966 4.02773562 Chrysotila carterae 13221 Haptophyta other_Eukaryota 150 9.869999999999998e-32   NTclustered gi|2429804553|ref|NC_069636.1| 13221 g17319 i0 89.831 39.0293159609121 118 10 38 2 65 180 33443 33560 Chrysotila carterae chloroplast, complete genome blastn 11982 150 1 Eukaryota Haptista   Haptophyta   Isochrysidales Isochrysidaceae Chrysotila Chrysotila carterae
27189987 27189987 PRJNA944406_P_NODE_68622_length_250_cov_0.870056_g67663_i0 PRJNA944406 68622 250 0.870056 2.17514 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 59.3 5.98e-8   NR KAL1526235.1 97485 g67663 i0 43.8 1.764 73 41 87.6 0 4 222 720 792 KAL1526235.1 hypothetical protein AB1Y20_014957 [Prymnesium parvum] diamond 441 59.3 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
27783634 27783634 PRJNA944406_P_NODE_17944_length_309_cov_1.872881_g16985_i0 PRJNA944406 17944 309 1.872881 5.78720229 Chrysochromulina tobinii 1460289 Haptophyta other_Eukaryota 70.9 8.53e-14   NR KOO35440.1 1460289 g16985 i0 61.9 2.44660194174757 63 24 61.2 0 1 189 4 66 KOO35440.1 40s ribosomal protein s30 [Chrysochromulina tobinii] diamond 756 70.9 1 Eukaryota Haptista   Haptophyta   Prymnesiales Chrysochromulinaceae Chrysochromulina Chrysochromulina tobinii
28067608 28067608 PRJNA944406_P_NODE_38945_length_273_cov_1.955000_g37986_i0 PRJNA944406 38945 273 1.955 5.33715 Pavlovales sp. CCMP2436 483367 Haptophyta other_Eukaryota 75.1 1.09e-15   NR KAJ1628734.1 483367 g37986 i0 65 1.36263736263736 60 20 64.8 1 1 177 1 60 KAJ1628734.1 ribosomal protein S30 [Pavlovales sp. CCMP2436] diamond 372 75.1 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales     Pavlovales sp. CCMP2436
28604404 28604404 PRJNA944406_P_NODE_11207_length_373_cov_1.790000_g10248_i0 PRJNA944406 11207 373 1.79 6.6767 Chrysochromulina tobinii 1460289 Haptophyta other_Eukaryota 97.4 6.079999999999999e-23   NR KOO22770.1 1460289 g10248 i0 53 0.804289544235925 100 46 80.4 1 301 2 9 107 KOO22770.1 40s ribosomal protein [Chrysochromulina tobinii] diamond 300 97.4 1 Eukaryota Haptista   Haptophyta   Prymnesiales Chrysochromulinaceae Chrysochromulina Chrysochromulina tobinii
29084919 29084919 PRJNA944406_P_NODE_47068_length_266_cov_1.378238_g46109_i0 PRJNA944406 47068 266 1.378238 3.66611308 Prymnesiales 73028 Haptophyta other_Eukaryota 139 2.16e-36   NR KAL1495812.1 97485 g46109 i0 74.4 2.90977443609023 86 22 97 0 2 259 422 507 KAL1495812.1 hypothetical protein AB1Y20_016672 [Prymnesium parvum] diamond 774 139 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium parvum
29993854 29993854 PRJNA944406_P_NODE_53431_length_260_cov_1.465241_g52472_i0 PRJNA944406 53431 260 1.465241 3.8096266 Prymnesium sp. 2812485 Haptophyta other_Eukaryota 58.2 8.48e-8   NR KAL3910137.1 2812485 g52472 i0 36.6 0.819230769230769 71 45 81.9 0 244 32 138 208 KAL3910137.1 MAG: hypothetical protein SGPRY_009169, partial [Prymnesium sp.] diamond 213 58.2 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium sp.
30310198 30310198 PRJNA944406_P_NODE_32752_length_279_cov_1.495146_g31793_i0 PRJNA944406 32752 279 1.495146 4.17145734 Diacronema lutheri 2081491 Haptophyta other_Eukaryota 114 4.0400000000000005e-27   NR KAG8461052.1 2081491 g31793 i0 63.4 12.741935483871 93 33 100 1 279 1 414 505 KAG8461052.1 hypothetical protein KFE25_003621 [Diacronema lutheri] diamond 3555 114 1 Eukaryota Haptista   Haptophyta Pavlovophyceae Pavlovales Pavlovaceae Diacronema Diacronema lutheri
30758853 30758853 PRJNA944406_P_NODE_71154_length_249_cov_2.448864_g70195_i0 PRJNA944406 71154 249 2.448864 6.09767136 root 1 Root_unresolved Root_unresolved 97.8 1.6e-21   NR XP_005786291.1 280463 g70195 i0 58.5 6.80722891566265 82 32 98.8 1 3 248 343 422 XP_005786291.1 hypothetical protein EMIHUDRAFT_455687 [Emiliania huxleyi CCMP1516] diamond 1695 97.8 1 Eukaryota Haptista   Haptophyta   Isochrysidales Noelaerhabdaceae Emiliania Emiliania huxleyi
32270058 32270058 PRJNA944406_P_NODE_103798_length_242_cov_0.911243_g102839_i0 PRJNA944406 103798 242 0.911243 2.20520806 Prymnesium sp. 2812485 Haptophyta other_Eukaryota 92.8 1.4e-21   NR KAL3902345.1 2812485 g102839 i0 58.3 1.79752066115702 72 30 89.3 0 2 217 83 154 KAL3902345.1 MAG: hypothetical protein SGPRY_012103 [Prymnesium sp.] diamond 435 92.8 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;