RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA944406" and tax_clade = "Candidatus Thermofonsia Clade 3"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 5 ✖

bioproject 1

  • PRJNA944406 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11128102 11128102 PRJNA944406_P_NODE_3469_length_724_cov_2.629800_g2603_i0 PRJNA944406 3469 724 2.6298 19.039752 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 852 0   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g2603 i0 88 101.196132596685 725 81 99 6 1 723 3495256 3495976 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 73266 852 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
11128707 11128707 PRJNA944406_P_NODE_9029_length_414_cov_1.888563_g8070_i0 PRJNA944406 9029 414 1.888563 7.81865082 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 627 5.199999999999999e-175   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g8070 i0 94.175 34.4903381642512 412 23 99 1 1 412 3495669 3496079 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 14279 627 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
17503223 17503223 PRJNA944406_P_NODE_85194_length_246_cov_0.890173_g84235_i0 PRJNA944406 85194 246 0.890173 2.18982558 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 377 3.2300000000000003e-100   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g84235 i0 94.309 18.9512195121951 246 14 100 0 1 246 3495861 3496106 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 4662 377 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
20051362 20051362 PRJNA944406_P_NODE_60156_length_253_cov_2.561111_g59197_i0 PRJNA944406 60156 253 2.561111 6.47961083 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 318 2.05e-82   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g59197 i0 90.756 112.660079051383 238 22 94 0 1 238 3494746 3494983 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 28503 318 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
22601744 22601744 PRJNA944406_P_NODE_5338_length_561_cov_1.577869_g4394_i0 PRJNA944406 5338 561 1.577869 8.85184509 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 797 0   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g4394 i0 92.321 109.964349376114 560 43 99 0 1 560 3495138 3495697 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 61690 797 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;