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contig_metadata

6 rows where bioproject = "PRJNA944406", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Rokuibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Rokuibacteriota · 6 ✖

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA944406 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16227466 16227466 PRJNA944406_P_NODE_40653_length_272_cov_1.316583_g39694_i0 PRJNA944406 40653 272 1.316583 3.58110576 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 132 2.19e-34   NR TMQ22158.1 2053607 g39694 i0 84.4 1.97426470588235 90 14 99.3 0 1 270 369 458 TMQ22158.1 MAG: MFS transporter [Candidatus Rokuibacteriota bacterium] diamond 537 132 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
27594174 27594174 PRJNA944406_P_NODE_55624_length_258_cov_1.405405_g54665_i0 PRJNA944406 55624 258 1.405405 3.6259449 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 155 9.29e-47   NR RPH82258.1 2053607 g54665 i0 97.4 0.895348837209302 77 2 89.5 0 3 233 56 132 RPH82258.1 MAG: hypothetical protein EHM88_09980 [Candidatus Rokuibacteriota bacterium] diamond 231 155 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
29684367 29684367 PRJNA944406_P_NODE_77030_length_248_cov_0.880000_g76071_i0 PRJNA944406 77030 248 0.88 2.1824 Bacillati 1783272 Bacteria Bacteria 118 1.77e-29   NR MDO8477675.1 2053607 g76071 i0 65.9 2.96370967741935 82 28 99.2 0 247 2 65 146 MDO8477675.1 right-handed parallel beta-helix repeat-containing protein [Candidatus Rokuibacteriota bacterium] diamond 735 119 0.991596638655462 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
30373300 30373300 PRJNA944406_P_NODE_76852_length_248_cov_0.880000_g75893_i0 PRJNA944406 76852 248 0.88 2.1824 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 62.8 2.02e-9   NR RPH76642.1 2053607 g75893 i0 47.1 0.846774193548387 70 35 84.7 1 5 214 176 243 RPH76642.1 MAG: hypothetical protein EHM88_19290 [Candidatus Rokuibacteriota bacterium] diamond 210 62.8 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium
31099456 31099456 PRJNA944406_P_NODE_95275_length_244_cov_0.900585_g94316_i0 PRJNA944406 95275 244 0.900585 2.1974274 Candidatus Rokubacteria bacterium 13_2_2 1805369 Bacteria Bacteria 43.5 0.0198   NR OLB36679.1 1805369 g94316 i0 47.5 0.491803278688525 40 21 49.2 0 221 102 475 514 OLB36679.1 MAG: hypothetical protein AUI04_18430 [Candidatus Rokubacteria bacterium 13_2_20CM_2_64_8] diamond 120 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokubacteria bacterium 13_2_20CM_2_64_8
31991837 31991837 PRJNA944406_P_NODE_44298_length_268_cov_2.056410_g43339_i0 PRJNA944406 44298 268 2.05641 5.5111788 Bacillati 1783272 Bacteria Bacteria 116 6.69e-30   NR MBI2526603.1 2053607 g43339 i0 65.6 1.99253731343284 90 30 99.6 1 1 267 142 231 MBI2526603.1 OmpA family protein [Candidatus Rokuibacteriota bacterium] diamond 534 116 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;