RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA944150" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA944150 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28383305 28383305 PRJNA944150_P_NODE_36206_length_167_cov_0.864407_g35955_i0 PRJNA944150 36206 167 0.864407 1.44355969 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 47.4 3.13e-4   NR MDD2907890.1 2044595 g35955 i0 67.6 1.20359281437126 34 11 61.1 0 3 104 1105 1138 MDD2907890.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 201 47.4 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30278414 30278414 PRJNA944150_P_NODE_35912_length_167_cov_0.864407_g35661_i0 PRJNA944150 35912 167 0.864407 1.44355969 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 58.5 3.49e-8   NR NRH21172.1 2044595 g35661 i0 65.8 0.682634730538922 38 13 68.3 0 1 114 138 175 NRH21172.1 hypothetical protein [Candidatus Altimarinota bacterium] diamond 114 58.5 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
30657129 30657129 PRJNA944150_P_NODE_18853_length_203_cov_3.370130_g18602_i0 PRJNA944150 18853 203 3.37013 6.8413639 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 47.8 3.34e-4   NR MBW7954720.1 2044595 g18602 i0 63.6 0.487684729064039 33 12 48.8 0 202 104 207 239 MBW7954720.1 prolipoprotein diacylglyceryl transferase [Candidatus Altimarinota bacterium] diamond 99 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
31036640 31036640 PRJNA944150_P_NODE_30735_length_176_cov_1.173228_g30484_i0 PRJNA944150 30735 176 1.173228 2.06488128 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 60.1 1.14e-8   NR MDD3646810.1 2044595 g30484 i0 96.4 2.38636363636364 28 1 47.7 0 175 92 167 194 MDD3646810.1 ATP-binding cassette domain-containing protein [Candidatus Altimarinota bacterium] diamond 420 60.1 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
32837982 32837982 PRJNA944150_P_NODE_43400_length_162_cov_0.902655_g43149_i0 PRJNA944150 43400 162 0.902655 1.4623011 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 90.5 1.81e-19   NR MBW7954675.1 2044595 g43149 i0 88.7 0.981481481481482 53 6 98.1 0 160 2 491 543 MBW7954675.1 sodium:proton antiporter [Candidatus Altimarinota bacterium] diamond 159 90.5 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;