contig_metadata
26 rows where bioproject = "PRJNA944150", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13677432 | 13677432 | PRJNA944150_P_NODE_42331_length_163_cov_0.894737_g42080_i0 | PRJNA944150 | 42331 | 163 | 0.894737 | 1.45842131 | Myxococcus xanthus | 34 | Bacteria | Bacteria | 159 | 7.779999999999998e-35 | NTclustered | gi|1691464223|gb|CP017171.1| | 34 | g42080 | i0 | 84.568 | 6.04294478527607 | 162 | 23 | 99 | 2 | 1 | 161 | 7039556 | 7039716 | Myxococcus xanthus strain KF3.2.8c11 chromosome, complete genome | blastn | 985 | 159 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 17501672 | 17501672 | PRJNA944150_P_NODE_17274_length_210_cov_2.664596_g17023_i0 | PRJNA944150 | 17274 | 210 | 2.664596 | 5.5956516 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 63.5 | 8.3e-11 | NR | MBP1687414.1 | 2026735 | g17023 | i0 | 87.9 | 0.471428571428571 | 33 | 4 | 47.1 | 0 | 99 | 1 | 34 | 66 | MBP1687414.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 99 | 63.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 22936787 | 22936787 | PRJNA944150_P_NODE_16518_length_210_cov_5.111801_g16267_i0 | PRJNA944150 | 16518 | 210 | 5.111801 | 10.7347821 | Myxococcus | 32 | Bacteria | Bacteria | 298 | 2.14e-76 | NTclustered | gi|2318731907|gb|CP104804.1| | 34 | g16267 | i0 | 90.367 | 23.8857142857143 | 218 | 13 | 100 | 1 | 1 | 210 | 3502578 | 3502795 | Myxococcus xanthus strain DK1050 chromosome | blastn | 5016 | 298 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus xanthus | ||
| 26993376 | 26993376 | PRJNA944150_P_NODE_35722_length_167_cov_1.364407_g35471_i0 | PRJNA944150 | 35722 | 167 | 1.364407 | 2.27855969 | Pyxidicoccus sp. 3LG | 3383247 | Bacteria | Bacteria | 77.4 | 2.19e-15 | NR | MFP2930326.1 | 3383247 | g35471 | i0 | 69.1 | 1.97604790419162 | 55 | 17 | 98.8 | 0 | 1 | 165 | 79 | 133 | MFP2930326.1 SDR family NAD(P)-dependent oxidoreductase [Pyxidicoccus sp. 3LG] | diamond | 330 | 77.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Pyxidicoccus | Pyxidicoccus sp. 3LG | ||
| 27278237 | 27278237 | PRJNA944150_P_NODE_28083_length_181_cov_1.363636_g27832_i0 | PRJNA944150 | 28083 | 181 | 1.363636 | 2.46818116 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 49.7 | 2.46e-5 | NR | MDX2086943.1 | 2212474 | g27832 | i0 | 58.3 | 0.596685082872928 | 36 | 15 | 59.7 | 0 | 109 | 2 | 1 | 36 | MDX2086943.1 PaaI family thioesterase [Kofleriaceae bacterium] | diamond | 108 | 49.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 27695808 | 27695808 | PRJNA944150_P_NODE_44664_length_161_cov_1.303571_g44413_i0 | PRJNA944150 | 44664 | 161 | 1.303571 | 2.09874931 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 102 | 2.75e-24 | NR | WP_002616054.1 | 41 | g44413 | i0 | 88.7 | 4.93788819875776 | 53 | 6 | 98.8 | 0 | 2 | 160 | 273 | 325 | WP_002616054.1 hypothetical protein [Stigmatella aurantiaca] | diamond | 795 | 102 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 28390076 | 28390076 | PRJNA944150_P_NODE_44886_length_161_cov_0.910714_g44635_i0 | PRJNA944150 | 44886 | 161 | 0.910714 | 1.46624954 | Archangium | 47 | Bacteria | Bacteria | 51.2 | 1.14e-6 | NR | MBL8910571.1 | 1872627 | g44635 | i0 | 95.5 | 1.22981366459627 | 22 | 1 | 41 | 0 | 2 | 67 | 64 | 85 | MBL8910571.1 hypothetical protein [Archangium sp.] | diamond | 198 | 51.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. | ||
| 28636179 | 28636179 | PRJNA944150_P_NODE_46207_length_158_cov_3.330275_g45956_i0 | PRJNA944150 | 46207 | 158 | 3.330275 | 5.2618345 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 60.5 | 6.47e-9 | NR | MET0591273.1 | 2268199 | g45956 | i0 | 53.8 | 1.9746835443038 | 52 | 24 | 98.7 | 0 | 2 | 157 | 513 | 564 | MET0591273.1 Ig-like domain-containing protein [Polyangiaceae bacterium] | diamond | 312 | 60.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 29867367 | 29867367 | PRJNA944150_P_NODE_47091_length_155_cov_2.839623_g46840_i0 | PRJNA944150 | 47091 | 155 | 2.839623 | 4.40141565 | Archangium gephyra | 48 | Bacteria | Bacteria | 87.4 | 1.33e-18 | NR | WP_047857745.1 | 48 | g46840 | i0 | 72.5 | 3.94838709677419 | 51 | 14 | 98.7 | 0 | 154 | 2 | 304 | 354 | WP_047857745.1 NAD(P)/FAD-dependent oxidoreductase [Archangium gephyra] | diamond | 612 | 87.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 29899029 | 29899029 | PRJNA944150_P_NODE_32811_length_172_cov_1.487805_g32560_i0 | PRJNA944150 | 32811 | 172 | 1.487805 | 2.5590246 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 83.2 | 7.74e-17 | NR | MCA9593600.1 | 2026763 | g32560 | i0 | 64.3 | 0.976744186046512 | 56 | 20 | 97.7 | 0 | 170 | 3 | 890 | 945 | MCA9593600.1 DNA gyrase subunit B [Myxococcales bacterium] | diamond | 168 | 83.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 30025443 | 30025443 | PRJNA944150_P_NODE_27731_length_181_cov_4.234848_g27480_i0 | PRJNA944150 | 27731 | 181 | 4.234848 | 7.66507488 | Myxococcaceae bacterium | 2484252 | Bacteria | Bacteria | 60.8 | 6.69e-9 | NR | MBN1204746.1 | 2484252 | g27480 | i0 | 50 | 4.95580110497238 | 60 | 29 | 99.4 | 1 | 181 | 2 | 217 | 275 | MBN1204746.1 M13 family metallopeptidase [Myxococcaceae bacterium] | diamond | 897 | 60.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcaceae bacterium | |||
| 30278405 | 30278405 | PRJNA944150_P_NODE_22852_length_190_cov_3.255319_g22601_i0 | PRJNA944150 | 22852 | 190 | 3.255319 | 6.1851061 | Archangium sp. | 1872627 | Bacteria | Bacteria | 77.4 | 1.07e-14 | NR | MDP1822268.1 | 1872627 | g22601 | i0 | 73.7 | 0.9 | 57 | 15 | 90 | 0 | 188 | 18 | 300 | 356 | MDP1822268.1 serine/threonine-protein kinase [Archangium sp.] | diamond | 171 | 77.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. | ||
| 30341763 | 30341763 | PRJNA944150_P_NODE_12332_length_243_cov_2.603093_g12081_i0 | PRJNA944150 | 12332 | 243 | 2.603093 | 6.32551599 | Nannocystis sp. | 1962667 | Bacteria | Bacteria | 52.4 | 1.47e-5 | NR | MBK8260160.1 | 1962667 | g12081 | i0 | 71.9 | 0.395061728395062 | 32 | 9 | 39.5 | 0 | 140 | 235 | 1 | 32 | MBK8260160.1 hypothetical protein [Nannocystis sp.] | diamond | 96 | 52.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis sp. | |||
| 30341781 | 30341781 | PRJNA944150_P_NODE_33672_length_170_cov_2.520661_g33421_i0 | PRJNA944150 | 33672 | 170 | 2.520661 | 4.2851237 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 74.3 | 1e-13 | NR | HVU05189.1 | 2268199 | g33421 | i0 | 67.3 | 1.90588235294118 | 55 | 18 | 97.1 | 0 | 4 | 168 | 406 | 460 | HVU05189.1 carboxylesterase family protein [Polyangiaceae bacterium] | diamond | 324 | 74.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 30530705 | 30530705 | PRJNA944150_P_NODE_41993_length_163_cov_0.894737_g41742_i0 | PRJNA944150 | 41993 | 163 | 0.894737 | 1.45842131 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 65.9 | 8.91e-11 | NR | MBK9263552.1 | 2268199 | g41742 | i0 | 57.4 | 0.993865030674847 | 54 | 23 | 99.4 | 0 | 162 | 1 | 806 | 859 | MBK9263552.1 protein kinase [Polyangiaceae bacterium] | diamond | 162 | 65.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 30600694 | 30600694 | PRJNA944150_P_NODE_28753_length_180_cov_1.061069_g28502_i0 | PRJNA944150 | 28753 | 180 | 1.061069 | 1.9099242 | Bacteria | 2 | Bacteria | Bacteria | 87 | 1.02e-19 | NR | MEI8254619.1 | 2026735 | g28502 | i0 | 75.4 | 2.85 | 57 | 14 | 95 | 0 | 173 | 3 | 16 | 72 | MEI8254619.1 hypoxanthine phosphoribosyltransferase [Deltaproteobacteria bacterium] | diamond | 513 | 87 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30657130 | 30657130 | PRJNA944150_P_NODE_19873_length_199_cov_3.093333_g19622_i0 | PRJNA944150 | 19873 | 199 | 3.093333 | 6.15573267 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 70.9 | 2.41e-12 | NR | MFT7622391.1 | 2818507 | g19622 | i0 | 70.5 | 1.92964824120603 | 44 | 13 | 66.3 | 0 | 199 | 68 | 135 | 178 | MFT7622391.1 UDP-N-acetyl-D-glucosamine dehydrogenase [Myxococcota bacterium] | diamond | 384 | 70.9 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 30657143 | 30657143 | PRJNA944150_P_NODE_40313_length_164_cov_0.886957_g40062_i0 | PRJNA944150 | 40313 | 164 | 0.886957 | 1.45460948 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 51.2 | 1.28e-5 | NR | MDB4966015.1 | 2026763 | g40062 | i0 | 51.9 | 0.951219512195122 | 52 | 23 | 91.5 | 1 | 11 | 160 | 100 | 151 | MDB4966015.1 hypothetical protein [Myxococcales bacterium] | diamond | 156 | 51.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 30941729 | 30941729 | PRJNA944150_P_NODE_25754_length_185_cov_1.801471_g25503_i0 | PRJNA944150 | 25754 | 185 | 1.801471 | 3.33272135 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 124 | 9.91e-33 | NR | MBK6686445.1 | 2026735 | g25503 | i0 | 93.4 | 0.989189189189189 | 61 | 4 | 98.9 | 0 | 2 | 184 | 163 | 223 | MBK6686445.1 fatty acid desaturase [Deltaproteobacteria bacterium] | diamond | 183 | 124 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 30973278 | 30973278 | PRJNA944150_P_NODE_43814_length_162_cov_0.902655_g43563_i0 | PRJNA944150 | 43814 | 162 | 0.902655 | 1.4623011 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 81.6 | 2.23e-16 | NR | MBN8540325.1 | 2026735 | g43563 | i0 | 76.9 | 0.962962962962963 | 52 | 12 | 96.3 | 0 | 158 | 3 | 392 | 443 | MBN8540325.1 transcription termination/antitermination protein NusA [Deltaproteobacteria bacterium] | diamond | 156 | 81.6 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 31289065 | 31289065 | PRJNA944150_P_NODE_32495_length_172_cov_3.512195_g32244_i0 | PRJNA944150 | 32495 | 172 | 3.512195 | 6.0409754 | Anaeromyxobacteraceae bacterium | 2510643 | Bacteria | Bacteria | 78.2 | 4.42e-15 | NR | HVI73372.1 | 2510643 | g32244 | i0 | 83 | 2.52906976744186 | 47 | 8 | 82 | 0 | 30 | 170 | 4 | 50 | HVI73372.1 FAD-dependent oxidoreductase [Anaeromyxobacteraceae bacterium] | diamond | 435 | 78.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacteraceae bacterium | |||
| 31605567 | 31605567 | PRJNA944150_P_NODE_38536_length_165_cov_1.560345_g38285_i0 | PRJNA944150 | 38536 | 165 | 1.560345 | 2.57456925 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 87.4 | 2.29e-18 | NR | MFC1641895.1 | 2818507 | g38285 | i0 | 72.2 | 2.94545454545455 | 54 | 15 | 98.2 | 0 | 2 | 163 | 197 | 250 | MFC1641895.1 methionine--tRNA ligase [Myxococcota bacterium] | diamond | 486 | 87.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 31637048 | 31637048 | PRJNA944150_P_NODE_44436_length_161_cov_1.723214_g44185_i0 | PRJNA944150 | 44436 | 161 | 1.723214 | 2.77437454 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 55.1 | 6.92e-8 | NR | MBT3259003.1 | 2026735 | g44185 | i0 | 46.7 | 0.838509316770186 | 45 | 24 | 83.9 | 0 | 25 | 159 | 44 | 88 | MBT3259003.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 135 | 55.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 31890096 | 31890096 | PRJNA944150_P_NODE_36217_length_167_cov_0.864407_g35966_i0 | PRJNA944150 | 36217 | 167 | 0.864407 | 1.44355969 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 75.5 | 3.18e-14 | NR | MSP60099.1 | 2026763 | g35966 | i0 | 64.3 | 1.0059880239521 | 56 | 19 | 98.8 | 1 | 2 | 166 | 21 | 76 | MSP60099.1 ATP-binding protein [Myxococcales bacterium] | diamond | 168 | 75.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 32396525 | 32396525 | PRJNA944150_P_NODE_3299_length_468_cov_2.558473_g3051_i0 | PRJNA944150 | 3299 | 468 | 2.558473 | 11.97365364 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 45.4 | 0.0352 | NR | RLB60749.1 | 2026735 | g3051 | i0 | 48.9 | 0.288461538461538 | 45 | 23 | 28.8 | 0 | 218 | 84 | 175 | 219 | RLB60749.1 MAG: hypothetical protein DRI90_12965, partial [Deltaproteobacteria bacterium] | diamond | 135 | 45.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 32491523 | 32491523 | PRJNA944150_P_NODE_28659_length_180_cov_1.290076_g28408_i0 | PRJNA944150 | 28659 | 180 | 1.290076 | 2.3221368 | Archangium gephyra | 48 | Bacteria | Bacteria | 117 | 3.5499999999999996e-30 | NR | PZR15519.1 | 48 | g28408 | i0 | 98.3 | 0.983333333333333 | 59 | 1 | 98.3 | 0 | 179 | 3 | 110 | 168 | PZR15519.1 MAG: LysR family transcriptional regulator [Archangium gephyra] | diamond | 177 | 117 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;