RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA944150", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA944150 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18775215 18775215 PRJNA944150_P_NODE_12495_length_241_cov_3.244792_g12244_i0 PRJNA944150 12495 241 3.244792 7.81994872 Bradybaena similaris 145626 Mollusca Mollusca 58.4 4.66e-4   NTclustered gi|2913000417|dbj|AP039607.1| 145626 g12244 i0 97.143 6.85477178423236 35 0 15 1 33 66 11325993 11326027 Bradybaena similaris mixture of YIPCMo001421 and YIPCMo001540 DNA, chromosome 26, sequence blastn 1652 58.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Stylommatophora Camaenidae Bradybaena Bradybaena similaris
28895201 28895201 PRJNA944150_P_NODE_20828_length_197_cov_1.770270_g20577_i0 PRJNA944150 20828 197 1.77027 3.4874319 Opisthokonta 33154 Mollusca Mollusca 49.7 7.29e-5   NR CAI9738446.1 6645 g20577 i0 36.4 20.9238578680203 66 40 97.5 1 2 193 614 679 CAI9738446.1 serine/threonine-protein kinase N2 isoform X1 [Octopus vulgaris] diamond 4122 50.1 0.992015968063872 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;