RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA944150", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 5 ✖

tax_kingdom 1

  • Bacillati · 5 ✖

bioproject 1

  • PRJNA944150 · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7301591 7301591 PRJNA944150_P_NODE_20706_length_197_cov_3.675676_g20455_i0 PRJNA944150 20706 197 3.675676 7.24108172 Capsulimonas corticalis 2219043 Bacteria Bacteria 52.8 0.017   NTclustered gi|2240447379|dbj|AP025739.1| 2219043 g20455 i0 100 0.142131979695431 28 0 14 0 87 114 111686 111713 Capsulimonas corticalis AX-7 DNA, complete genome blastn 28 52.8 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis
26961843 26961843 PRJNA944150_P_NODE_44922_length_161_cov_0.910714_g44671_i0 PRJNA944150 44922 161 0.910714 1.46624954 Armatimonadota bacterium 2033014 Bacteria Bacteria 93.2 8.47e-22   NR MBC7804849.1 2033014 g44671 i0 84.9 0.987577639751553 53 8 98.8 0 159 1 73 125 MBC7804849.1 NADPH-dependent FMN reductase [Armatimonadota bacterium] diamond 159 93.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30783583 30783583 PRJNA944150_P_NODE_29374_length_178_cov_2.511628_g29123_i0 PRJNA944150 29374 178 2.511628 4.47069784 Armatimonas sp. 1872638 Bacteria Bacteria 43.1 0.00536   NR WP_395091411.1 1872638 g29123 i0 65.5 0.48876404494382 29 10 48.9 0 87 1 32 60 WP_395091411.1 GNAT family N-acetyltransferase [Armatimonas sp.] diamond 87 43.1 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas sp.
32586370 32586370 PRJNA944150_P_NODE_36259_length_167_cov_0.864407_g36008_i0 PRJNA944150 36259 167 0.864407 1.44355969 Armatimonadota bacterium 2033014 Bacteria Bacteria 60.5 6.87e-9   NR MBI3927748.1 2033014 g36008 i0 49.1 0.988023952095808 55 28 98.8 0 1 165 106 160 MBI3927748.1 hypothetical protein [Armatimonadota bacterium] diamond 165 60.5 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32712082 32712082 PRJNA944150_P_NODE_45440_length_161_cov_0.910714_g45189_i0 PRJNA944150 45440 161 0.910714 1.46624954 Armatimonas rosea 685828 Bacteria Bacteria 91.7 7.12e-20   NR WP_184195847.1 685828 g45189 i0 75.5 0.987577639751553 53 13 98.8 0 3 161 212 264 WP_184195847.1 beta-L-arabinofuranosidase domain-containing protein [Armatimonas rosea] diamond 159 91.7 1 Bacteria   Bacillati Armatimonadota Armatimonadia Armatimonadales Armatimonadaceae Armatimonas Armatimonas rosea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;