RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA944150", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA944150 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2198768 2198768 PRJNA944150_P_NODE_10342_length_266_cov_3.050691_g10091_i0 PRJNA944150 10342 266 3.050691 8.11483806 Theileria parva 5875 SAR_Eukaryotes SAR_Eukaryotes 106 1.84e-18   NTclustered gi|755080|gb|L41148.1| 5875 g10091 i0 79.042 8.33458646616541 167 26 68 7 85 247 277 438 Theileria parva schizont/sporozoite surface protein gene, unknown genes and partial cds blastn 2217 106 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria parva
4752012 4752012 PRJNA944150_P_NODE_30684_length_176_cov_1.299213_g30433_i0 PRJNA944150 30684 176 1.299213 2.28661488 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 243 8.21e-60   NTclustered gi|820695469|tpe|LN714488.1| 572307 g30433 i0 91.477 7.10227272727273 176 15 100 0 1 176 300668 300493 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 1250 243 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;