RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA944150", tax_clade = "Opisthokonta" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA944150 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11127211 11127211 PRJNA944150_P_NODE_28589_length_180_cov_1.427481_g28338_i0 PRJNA944150 28589 180 1.427481 2.5694658 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 283 4.97e-72   NTclustered gi|56757963|gb|AY815390.1| 6182 g28338 i0 96.023 98.4444444444444 176 4 100 3 1 175 1860 1687 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 17720 283 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
26867258 26867258 PRJNA944150_P_NODE_12881_length_238_cov_1.079365_g12630_i0 PRJNA944150 12881 238 1.079365 2.5688887 Taenia asiatica 60517 Platyhelminthes Platyhelminthes 42.4 0.0455   NR VDK20603.1 60517 g12630 i0 32.7 0.69327731092437 55 37 69.3 0 27 191 351 405 VDK20603.1 unnamed protein product [Taenia asiatica] diamond 165 42.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Taenia Taenia asiatica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;