RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA944150", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA944150 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29867354 29867354 PRJNA944150_P_NODE_20951_length_196_cov_4.435374_g20700_i0 PRJNA944150 20951 196 4.435374 8.69333304 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 42.4 0.0268   NR MBK6679531.1 2049428 g20700 i0 50 0.551020408163265 36 12 55.1 1 86 193 93 122 MBK6679531.1 hypothetical protein [Ignavibacteriales bacterium] diamond 108 42.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium
30657142 30657142 PRJNA944150_P_NODE_39833_length_164_cov_1.817391_g39582_i0 PRJNA944150 39833 164 1.817391 2.98052124 Ignavibacteria bacterium CG22_combo_CG1 2053306 Bacteria Bacteria 73.2 5.28e-15   NR PIP76190.1 1974042 g39582 i0 66.7 0.768292682926829 42 14 76.8 0 2 127 65 106 PIP76190.1 MAG: hypothetical protein COW85_15450 [Ignavibacteria bacterium CG22_combo_CG10-13_8_21_14_all_37_15] diamond 126 73.2 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium CG22_combo_CG10-13_8_21_14_all_37_15
32079957 32079957 PRJNA944150_P_NODE_18638_length_205_cov_0.980769_g18387_i0 PRJNA944150 18638 205 0.980769 2.01057645 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 52.4 8.24e-6   NR MCK7518055.1 2049428 g18387 i0 74.1 0.395121951219512 27 7 39.5 0 1 81 265 291 MCK7518055.1 ATP-dependent DNA ligase [Ignavibacteriales bacterium] diamond 81 52.4 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;