RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA944150", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA944150 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20050411 20050411 PRJNA944150_P_NODE_45556_length_161_cov_0.875000_g45305_i0 PRJNA944150 45556 161 0.875 1.40875 Fidelibacterota bacterium 2026760 Bacteria Bacteria 104 3.4e-25   NR NQU67145.1 2026760 g45305 i0 90.6 19.7515527950311 53 5 98.8 0 161 3 158 210 NQU67145.1 aldo/keto reductase [Fidelibacterota bacterium] diamond 3180 104 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27348346 27348346 PRJNA944150_P_NODE_5463_length_366_cov_3.520505_g5212_i0 PRJNA944150 5463 366 3.520505 12.8850483 Pseudomonadati 3379134 Bacteria Bacteria 73.2 3.2e-12   NR MCD6441053.1 2026760 g5212 i0 66.7 2.98360655737705 48 16 39.3 0 146 3 5 52 MCD6441053.1 MFS transporter [Fidelibacterota bacterium] diamond 1092 73.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;