RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA944150", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Parcubacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Parcubacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA944150 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27436332 27436332 PRJNA944150_P_NODE_11963_length_247_cov_2.525253_g11712_i0 PRJNA944150 11963 247 2.525253 6.23737491 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 60.8 5.87e-9   NR RMD61733.1 2762014 g11712 i0 70 0.48582995951417 40 12 48.6 0 215 96 168 207 RMD61733.1 MAG: hypothetical protein D6833_07845, partial [Candidatus Parcubacteria bacterium] diamond 120 60.8 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium
29582815 29582815 PRJNA944150_P_NODE_12870_length_238_cov_1.349206_g12619_i0 PRJNA944150 12870 238 1.349206 3.21111028 Candidatus Parcubacteria bacterium 2762014 Bacteria Bacteria 138 9.4e-38   NR RMD61734.1 2762014 g12619 i0 87.2 0.983193277310924 78 10 98.3 0 3 236 133 210 RMD61734.1 MAG: N4-gp56 family major capsid protein [Candidatus Parcubacteria bacterium] diamond 234 138 1 Bacteria Bacteria candidate phyla   Candidatus Parcubacteria         Candidatus Parcubacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;