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contig_metadata

28 rows where bioproject = "PRJNA942359" and tax_phylum = "Nitrososphaerota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nitrososphaerota · 28 ✖

tax_kingdom 1

bioproject 1

  • PRJNA942359 · 28 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3473883 3473883 PRJNA942359_P_NODE_4943_length_371_cov_1.325503_g4828_i0 PRJNA942359 4943 371 1.325503 4.91761613 Nitrosopumilus sp. 2024843 Archaea Archaea 198 4.279999999999999e-46   NTclustered gi|2805380108|emb|OY763927.2| 2024843 g4828 i0 84.577 3.94070080862534 201 29 54 2 2 201 1728036 1727837 MAG: Nitrosopumilus sp. isolate e501d42f-d10b-4094-a589-3c4c61670bda genome assembly, chromosome: 1 blastn 1462 198 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
4751198 4751198 PRJNA942359_P_NODE_10324_length_277_cov_2.823529_g10209_i0 PRJNA942359 10324 277 2.823529 7.82117533 Candidatus Nitrosarchaeum limnium 1007084 Archaea Archaea 98.2 1.86e-21   NR WP_048097151.1 1007084 g10209 i0 60.8 2.11191335740072 102 30 99.6 3 276 1 503 604 WP_048097151.1 beta strand repeat-containing protein, partial [Candidatus Nitrosarchaeum limnium] diamond 585 98.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Candidatus Nitrosarchaeum limnium
5087170 5087170 PRJNA942359_P_NODE_6284_length_336_cov_1.969582_g6169_i0 PRJNA942359 6284 336 1.969582 6.61779552 Nitrosarchaeum sp. 2026886 Archaea Archaea 224 6.82e-70   NR MBS3926316.1 2026886 g6169 i0 96.4 2 112 4 100 0 336 1 203 314 MBS3926316.1 hypothetical protein [Nitrosarchaeum sp.] diamond 672 224 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp.
6026165 6026165 PRJNA942359_P_NODE_19385_length_243_cov_0.917647_g19270_i0 PRJNA942359 19385 243 0.917647 2.22988221 Nitrosopumilus sp. 2024843 Archaea Archaea 183 7.44e-42   NTclustered gi|2805380108|emb|OY763927.2| 2024843 g19270 i0 81.532 3.67901234567901 222 41 91 0 1 222 944397 944176 MAG: Nitrosopumilus sp. isolate e501d42f-d10b-4094-a589-3c4c61670bda genome assembly, chromosome: 1 blastn 894 183 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
7300935 7300935 PRJNA942359_P_NODE_11846_length_262_cov_9.910053_g11731_i0 PRJNA942359 11846 262 9.910053 25.96433886 Nitrosarchaeum sp. AC2 2259673 Archaea Archaea 440 4.369999999999998e-119   NTclustered gi|1869229208|gb|CP030847.1| 2259673 g11731 i0 96.947 40.4236641221374 262 8 100 0 1 262 578376 578637 Nitrosarchaeum sp. AC2 chromosome, complete genome blastn 10591 440 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp. AC2
7301109 7301109 PRJNA942359_P_NODE_19866_length_242_cov_0.923077_g19751_i0 PRJNA942359 19866 242 0.923077 2.23384634 Nitrosarchaeum 1007082 Archaea Archaea 128 3.4599999999999995e-35   NR WP_010195597.1 1007084 g19751 i0 79 1.99586776859504 81 16 99.2 1 240 1 8 88 WP_010195597.1 hypothetical protein, partial [Candidatus Nitrosarchaeum limnium] diamond 483 128 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Candidatus Nitrosarchaeum limnium
8575744 8575744 PRJNA942359_P_NODE_107_length_1838_cov_16.643626_g86_i0 PRJNA942359 107 1838 16.643626 305.90984588 Nitrosarchaeum sp. AC2 2259673 Archaea Archaea 3330 0   NTclustered gi|1869229208|gb|CP030847.1| 2259673 g86 i0 99.402 94.5625680087051 1838 8 99 3 1 1837 1087534 1085699 Nitrosarchaeum sp. AC2 chromosome, complete genome blastn 173806 3330 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp. AC2
11126804 11126804 PRJNA942359_P_NODE_9_length_3698_cov_10.394759_g6_i0 PRJNA942359 9 3698 10.394759 384.39818782 Nitrosarchaeum sp. AC2 2259673 Archaea Archaea 3701 0   NTclustered gi|1869229208|gb|CP030847.1| 2259673 g6 i0 88.766 13.9226608977826 3071 282 83 44 1 3053 1517726 1520751 Nitrosarchaeum sp. AC2 chromosome, complete genome blastn 51486 3701 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp. AC2
13676784 13676784 PRJNA942359_P_NODE_4971_length_370_cov_1.548822_g4856_i0 PRJNA942359 4971 370 1.548822 5.7306414 uncultured marine thaumarchaeote 1167203 Archaea Archaea 584 2.7999999999999987e-162   NTclustered gi|381214692|gb|JN257642.1| 1167203 g4856 i0 95.135 100.656756756757 370 18 100 0 1 370 729 360 Uncultured marine thaumarchaeote clone BG20_24 copper-containing nitrite reductase (nirK) gene, partial cds blastn 37243 584 1 Archaea   Thermoproteati Nitrososphaerota         uncultured marine thaumarchaeote
14950989 14950989 PRJNA942359_P_NODE_212_length_1467_cov_13.237446_g177_i0 PRJNA942359 212 1467 13.237446 194.19333282 Candidatus Nitrosarchaeum limnium 1007084 Archaea Archaea 669 9.959999999999999e-228   NR WP_048097151.1 1007084 g177 i0 72.3 2.03680981595092 499 123 99.8 5 1465 2 3 497 WP_048097151.1 beta strand repeat-containing protein, partial [Candidatus Nitrosarchaeum limnium] diamond 2988 669 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Candidatus Nitrosarchaeum limnium
14951113 14951113 PRJNA942359_P_NODE_8832_length_292_cov_1.780822_g8717_i0 PRJNA942359 8832 292 1.780822 5.20000024 Nitrosopumilus sp. K4 2795383 Archaea Archaea 209 1.52e-49   NTclustered gi|2028944715|gb|CP067007.1| 2795383 g8717 i0 79.795 10.2808219178082 292 55 99 4 3 292 102647 102358 Nitrosopumilus sp. K4 chromosome, complete genome blastn 3002 209 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp. K4
16226051 16226051 PRJNA942359_P_NODE_6493_length_332_cov_1.451737_g6378_i0 PRJNA942359 6493 332 1.451737 4.81976684 Nitrosarchaeum sp. AC2 2259673 Archaea Archaea 603 6.889999999999997e-168   NTclustered gi|1869229208|gb|CP030847.1| 2259673 g6378 i0 99.398 33.7710843373494 332 2 100 0 1 332 1473140 1472809 Nitrosarchaeum sp. AC2 chromosome, complete genome blastn 11212 603 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp. AC2
18774590 18774590 PRJNA942359_P_NODE_11535_length_265_cov_3.536458_g11420_i0 PRJNA942359 11535 265 3.536458 9.3716137 Nitrosarchaeum sp. AC2 2259673 Archaea Archaea 473 4.3599999999999987e-129   NTclustered gi|1869229208|gb|CP030847.1| 2259673 g11420 i0 98.868 53.9584905660377 265 3 100 0 1 265 1087842 1087578 Nitrosarchaeum sp. AC2 chromosome, complete genome blastn 14299 473 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp. AC2
18774788 18774788 PRJNA942359_P_NODE_20615_length_230_cov_2.866242_g20500_i0 PRJNA942359 20615 230 2.866242 6.5923566 Nitrosopumilus ureiphilus 1470067 Archaea Archaea 307 3.97e-79   NTclustered gi|1869224726|gb|CP026995.1| 1470067 g20500 i0 90.83 20.1782608695652 229 21 99 0 1 229 1951786 1951558 Nitrosopumilus ureiphilus strain PS0 chromosome, complete genome blastn 4641 307 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus ureiphilus
18774929 18774929 PRJNA942359_P_NODE_8815_length_292_cov_5.264840_g8700_i0 PRJNA942359 8815 292 5.26484 15.3733328 Nitrosarchaeum sp. AC2 2259673 Archaea Archaea 529 1.0299999999999996e-145   NTclustered gi|1869229208|gb|CP030847.1| 2259673 g8700 i0 99.315 44.8493150684931 292 2 100 0 1 292 125013 125304 Nitrosarchaeum sp. AC2 chromosome, complete genome blastn 13096 529 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp. AC2
21325274 21325274 PRJNA942359_P_NODE_9657_length_284_cov_1.478673_g9542_i0 PRJNA942359 9657 284 1.478673 4.19943132 uncultured Nitrososphaerota archaeon 651141 Archaea Archaea 514 2.78e-141   NTclustered gi|829465045|gb|KM595935.1| 651141 g9542 i0 99.296 99.9366197183099 284 2 100 0 1 284 303 20 Uncultured thaumarchaeote clone P01-A58 AmoA (amoA) gene, partial cds blastn 28382 514 1 Archaea   Thermoproteati Nitrososphaerota         uncultured Nitrososphaerota archaeon
22599853 22599853 PRJNA942359_P_NODE_10198_length_279_cov_1.087379_g10083_i0 PRJNA942359 10198 279 1.087379 3.03378741 Nitrosarchaeum sp. AC2 2259673 Archaea Archaea 470 5.99e-128   NTclustered gi|1869229208|gb|CP030847.1| 2259673 g10083 i0 97.122 21.3584229390681 278 8 99 0 1 278 1632381 1632104 Nitrosarchaeum sp. AC2 chromosome, complete genome blastn 5959 470 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp. AC2
25149098 25149098 PRJNA942359_P_NODE_13460_length_252_cov_1.664804_g13345_i0 PRJNA942359 13460 252 1.664804 4.19530608 uncultured marine thaumarchaeote 1167203 Archaea Archaea 435 1.94e-117   NTclustered gi|381214652|gb|JN257622.1| 1167203 g13345 i0 98 74.5238095238095 250 5 99 0 3 252 981 732 Uncultured marine thaumarchaeote clone BA10_25 copper-containing nitrite reductase (nirK) gene, partial cds blastn 18780 435 1 Archaea   Thermoproteati Nitrososphaerota         uncultured marine thaumarchaeote
25149154 25149154 PRJNA942359_P_NODE_15880_length_248_cov_2.742857_g15765_i0 PRJNA942359 15880 248 2.742857 6.80228536 Nitrosarchaeum sp. AC2 2259673 Archaea Archaea 442 1.1399999999999995e-119   NTclustered gi|1869229208|gb|CP030847.1| 2259673 g15765 i0 98.79 28.9637096774194 248 3 100 0 1 248 1473113 1473360 Nitrosarchaeum sp. AC2 chromosome, complete genome blastn 7183 442 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Nitrosarchaeum sp. AC2
26676736 26676736 PRJNA942359_P_NODE_4721_length_378_cov_1.340984_g4606_i0 PRJNA942359 4721 378 1.340984 5.06891952 Nitrosopumilus sp. 2024843 Archaea Archaea 75.9 8.56e-14   NR MDH3833836.1 2024843 g4606 i0 51.5 1.07936507936508 68 33 54 0 376 173 169 236 MDH3833836.1 hypothetical protein [Nitrosopumilus sp.] diamond 408 75.9 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
27625691 27625691 PRJNA942359_P_NODE_4744_length_377_cov_1.940789_g4629_i0 PRJNA942359 4744 377 1.940789 7.31677453 Nitrosopumilus sp. 2024843 Archaea Archaea 88.2 1.44e-17   NR WP_368059013.1 2024843 g4629 i0 44.6 1.03448275862069 130 58 98.7 3 373 2 194 315 WP_368059013.1 hypothetical protein [Nitrosopumilus sp.] diamond 390 88.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
27783574 27783574 PRJNA942359_P_NODE_10004_length_280_cov_2.927536_g9889_i0 PRJNA942359 10004 280 2.927536 8.1971008 Candidatus Nitrosotenuis uzonensis 1407055 Archaea Archaea 133 4.51e-35   NR WP_205097554.1 1407055 g9889 i0 77.4 0.996428571428571 93 21 99.6 0 279 1 20 112 WP_205097554.1 trypsin-like serine protease [Candidatus Nitrosotenuis uzonensis] diamond 279 133 1 Archaea   Thermoproteati Nitrososphaerota       Candidatus Nitrosotenuis Candidatus Nitrosotenuis uzonensis
29204410 29204410 PRJNA942359_P_NODE_10709_length_273_cov_3.480000_g10594_i0 PRJNA942359 10709 273 3.48 9.5004 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 111 3.56e-28   NR MEX1150830.1 2202732 g10594 i0 64.8 0.967032967032967 88 31 96.7 0 10 273 49 136 MEX1150830.1 hypothetical protein [Nitrosopumilaceae archaeon] diamond 264 111 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon
29519914 29519914 PRJNA942359_P_NODE_20790_length_203_cov_4.161538_g20675_i0 PRJNA942359 20790 203 4.161538 8.44792214 Candidatus Nitrosarchaeum limnium 1007084 Archaea Archaea 109 5.230000000000001e-29   NR WP_193353005.1 1007084 g20675 i0 83.6 1.98029556650246 67 11 99 0 2 202 33 99 WP_193353005.1 hypothetical protein, partial [Candidatus Nitrosarchaeum limnium] diamond 402 109 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Candidatus Nitrosarchaeum limnium
31225768 31225768 PRJNA942359_P_NODE_1515_length_629_cov_1.785971_g1405_i0 PRJNA942359 1515 629 1.785971 11.23375759 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 280 2.08e-92   NR MEX1150829.1 2202732 g1405 i0 66.7 0.972972972972973 204 59 95.9 2 628 26 39 236 MEX1150829.1 hypothetical protein [Nitrosopumilaceae archaeon] diamond 612 280 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon
31921780 31921780 PRJNA942359_P_NODE_4317_length_391_cov_1.962264_g4202_i0 PRJNA942359 4317 391 1.962264 7.67245224 Nitrosopumilus sp. 2024843 Archaea Archaea 141 4.75e-39   NR MDH3833836.1 2024843 g4202 i0 54.7 0.982097186700767 128 57 97.4 1 386 6 3 130 MDH3833836.1 hypothetical protein [Nitrosopumilus sp.] diamond 384 141 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
32111674 32111674 PRJNA942359_P_NODE_13778_length_252_cov_0.871508_g13663_i0 PRJNA942359 13778 252 0.871508 2.19620016 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 108 2.11e-25   NR MDW0176719.1 2169593 g13663 i0 68 0.892857142857143 75 24 89.3 0 2 226 65 139 MDW0176719.1 reverse transcriptase family protein [Nitrososphaeraceae archaeon] diamond 225 108 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
32900890 32900890 PRJNA942359_P_NODE_7460_length_314_cov_1.236515_g7345_i0 PRJNA942359 7460 314 1.236515 3.8826571 Candidatus Nitrosarchaeum limnium 1007084 Archaea Archaea 198 2.22e-62   NR WP_010195597.1 1007084 g7345 i0 91.3 1.98726114649682 104 9 99.4 0 2 313 75 178 WP_010195597.1 hypothetical protein, partial [Candidatus Nitrosarchaeum limnium] diamond 624 198 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosarchaeum Candidatus Nitrosarchaeum limnium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;