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contig_metadata

32 rows where bioproject = "PRJNA942359" and tax_phylum = "Microsporidia"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 32 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA942359 · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
923158 923158 PRJNA942359_P_NODE_9401_length_287_cov_1.093458_g9286_i0 PRJNA942359 9401 287 1.093458 3.13822446 Nosema bombycis 27978 Fungi Fungi 470 6.18e-128   NTclustered gi|157382911|gb|EF683103.1| 27978 g9286 i0 96.167 1 287 11 100 0 1 287 327 41 Nosema bombycis spore wall protein (HSWP3) gene, complete cds blastn 287 470 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
2198272 2198272 PRJNA942359_P_NODE_1642_length_605_cov_2.492481_g1532_i0 PRJNA942359 1642 605 2.492481 15.07951005 Microsporidium sp. Loire 1032359 Fungi Fungi 822 0   NTclustered gi|333036714|gb|HM566198.1| 1032359 g1532 i0 91.162 94.7702479338843 611 47 100 4 1 605 198 807 Microsporidium sp. Loire small subunit ribosomal RNA gene, partial sequence blastn 57336 822 1 Eukaryota Opisthokonta Fungi Microsporidia       Microsporidium Microsporidium sp. Loire
2198444 2198444 PRJNA942359_P_NODE_6262_length_337_cov_1.140152_g6147_i0 PRJNA942359 6262 337 1.140152 3.84231224 Nosema bombycis 27978 Fungi Fungi 568 2.5499999999999993e-157   NTclustered gi|157382909|gb|EF683102.1| 27978 g6147 i0 97.033 1 337 10 100 0 1 337 655 319 Nosema bombycis hypothetical spore wall protein (HSWP2) gene, complete cds blastn 337 568 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
4751459 4751459 PRJNA942359_P_NODE_3984_length_405_cov_1.409639_g3869_i0 PRJNA942359 3984 405 1.409639 5.70903795 Glugea eda 2529233 Fungi Fungi 117 1.36e-21   NTclustered gi|1581445003|gb|MK568064.1| 2529233 g3869 i0 87.619 4.68148148148148 105 8 25 5 261 362 1547 1445 Glugea eda voucher Yanbu-Saudi-LM-2017 small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 1896 117 1 Eukaryota Opisthokonta Fungi Microsporidia     Glugeidae Glugea Glugea eda
7301217 7301217 PRJNA942359_P_NODE_7106_length_320_cov_1.570850_g6991_i0 PRJNA942359 7106 320 1.57085 5.02672 Nosema bombycis 27978 Fungi Fungi 592 1.4299999999999996e-164   NTclustered gi|340764464|gb|HQ881497.1| 27978 g6991 i0 100 3 320 0 100 0 1 320 44 363 Nosema bombycis strain CQ1 spore wall protein 5 mRNA, complete cds blastn 960 592 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
8576003 8576003 PRJNA942359_P_NODE_4647_length_380_cov_2.420195_g4532_i0 PRJNA942359 4647 380 2.420195 9.196741 Nosema bombycis 27978 Fungi Fungi 652 0   NTclustered gi|326578132|gb|HQ291457.1| 27978 g4532 i0 97.889 0.997368421052632 379 5 99 2 2 380 657 282 Nosema bombycis clone NBO_3g0006 60S ribosomal protein L6 mRNA, partial cds blastn 379 652 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
9850952 9850952 PRJNA942359_P_NODE_16668_length_247_cov_0.965517_g16553_i0 PRJNA942359 16668 247 0.965517 2.38482699 Nosema bombycis 27978 Fungi Fungi 435 1.9e-117   NTclustered gi|157382913|gb|EF683104.1| 27978 g16553 i0 98.381 1 247 4 100 0 1 247 874 1120 Nosema bombycis hypothetical spore wall protein (HSWP4) gene, complete cds blastn 247 435 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
11126737 11126737 PRJNA942359_P_NODE_6569_length_331_cov_0.906977_g6454_i0 PRJNA942359 6569 331 0.906977 3.00209387 Nosema bombycis 27978 Fungi Fungi 601 2.4699999999999994e-167   NTclustered gi|340764466|gb|HQ881498.1| 27978 g6454 i0 99.396 18 331 2 100 0 1 331 664 334 Nosema bombycis strain CQ1 polar tube protein 2 mRNA, complete cds blastn 5958 601 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
11126743 11126743 PRJNA942359_P_NODE_6889_length_324_cov_1.721116_g6774_i0 PRJNA942359 6889 324 1.721116 5.57641584 Nosema bombycis 27978 Fungi Fungi 577 4.0599999999999986e-160   NTclustered gi|212292364|gb|EU848484.1| 27978 g6774 i0 98.765 2.78086419753086 324 4 100 0 1 324 388 65 Nosema bombycis histone H2B gene, complete cds blastn 901 577 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
12402223 12402223 PRJNA942359_P_NODE_5070_length_367_cov_1.527211_g4955_i0 PRJNA942359 5070 367 1.527211 5.60486437 Pseudoloma neurophilia 146866 Fungi Fungi 678 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g4955 i0 100 98.5613079019074 367 0 100 0 1 367 893 1259 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 36172 678 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
12402274 12402274 PRJNA942359_P_NODE_7450_length_314_cov_1.385892_g7335_i0 PRJNA942359 7450 314 1.385892 4.35170088 Nosema bombycis 27978 Fungi Fungi 544 3.98e-150   NTclustered gi|157382911|gb|EF683103.1| 27978 g7335 i0 98.077 0.993630573248408 312 6 99 0 1 312 328 639 Nosema bombycis spore wall protein (HSWP3) gene, complete cds blastn 312 544 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
17501081 17501081 PRJNA942359_P_NODE_13454_length_252_cov_1.692737_g13339_i0 PRJNA942359 13454 252 1.692737 4.26569724 Nosema bombycis 27978 Fungi Fungi 455 1.49e-123   NTclustered gi|326561244|gb|HQ291386.1| 27978 g13339 i0 99.206 122.924603174603 252 2 100 0 1 252 266 15 Nosema bombycis clone NBO_367g0007 40S ribosomal protein S31 mRNA, partial cds blastn 30977 455 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
17836287 17836287 PRJNA942359_P_NODE_7114_length_320_cov_1.279352_g6999_i0 PRJNA942359 7114 320 1.279352 4.0939264 Nosema 27977 Fungi Fungi 592 1.4299999999999996e-164   NTclustered gi|33414123|gb|AY259631.1| 27978 g6999 i0 100 85.015625 320 0 100 0 1 320 1370 1689 Nosema bombycis large subunit ribosomal RNA gene, internal transcribed spacer, small subunit ribosomal RNA gene, intergenic spacer region, and 5S ribosomal RNA gene, complete sequence blastn 27205 592 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
20385128 20385128 PRJNA942359_P_NODE_5196_length_363_cov_1.224138_g5081_i0 PRJNA942359 5196 363 1.224138 4.44362094 Nosema 27977 Fungi Fungi 665 0   NTclustered gi|33414123|gb|AY259631.1| 27978 g5081 i0 99.725 95.9504132231405 363 1 100 0 1 363 713 1075 Nosema bombycis large subunit ribosomal RNA gene, internal transcribed spacer, small subunit ribosomal RNA gene, intergenic spacer region, and 5S ribosomal RNA gene, complete sequence blastn 34830 665 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
22936534 22936534 PRJNA942359_P_NODE_10298_length_278_cov_1.131707_g10183_i0 PRJNA942359 10298 278 1.131707 3.14614546 Nosematidae 27974 Fungi Fungi 514 2.7199999999999996e-141   NTclustered gi|1845193512|gb|MT510128.1| 27978 g10183 i0 100 100 278 0 100 0 1 278 501 778 Nosema bombycis strain GNB3 small subunit ribosomal RNA gene, partial sequence blastn 27800 514 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
25485370 25485370 PRJNA942359_P_NODE_12340_length_258_cov_1.264865_g12225_i0 PRJNA942359 12340 258 1.264865 3.2633517 Endoreticulatus 42400 Fungi Fungi 466 7.08e-127   NTclustered gi|63095238|gb|AY960111.1| 262393 g12225 i0 99.225 4 258 2 100 0 1 258 608 865 Endoreticulatus sp. CHW-2004 Taiwan large subunit ribosomal RNA gene, complete sequence blastn 1032 466 1 Eukaryota Opisthokonta Fungi Microsporidia       Endoreticulatus Endoreticulatus sp. CHW-2004 Taiwan
25485408 25485408 PRJNA942359_P_NODE_20660_length_228_cov_2.490323_g20545_i0 PRJNA942359 20660 228 2.490323 5.67793644 Nosematidae 27974 Fungi Fungi 422 1.34e-113   NTclustered gi|170282854|gb|EU350380.1| 27978 g20545 i0 100 100 228 0 100 0 1 228 420 193 Nosema bombycis clone 9 small subunit ribosomal RNA, partial sequence; small subunit ribosomal RNA-5S ribosomal RNA intergenic spacer, complete sequence; and 5S ribosomal RNA, partial sequence blastn 22800 422 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
26961817 26961817 PRJNA942359_P_NODE_7062_length_321_cov_1.258065_g6947_i0 PRJNA942359 7062 321 1.258065 4.03838865 Nosema bombycis CQ1 578461 Fungi Fungi 194 5.82e-61   NR EOB14106.1 578461 g6947 i0 99.1 0.990654205607477 106 1 99.1 0 2 319 65 170 EOB14106.1 hypothetical protein NBO_38g0017 [Nosema bombycis CQ1] diamond 318 194 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
27056939 27056939 PRJNA942359_P_NODE_15142_length_250_cov_0.881356_g15027_i0 PRJNA942359 15142 250 0.881356 2.20339 Nosema granulosis 83296 Fungi Fungi 115 1.05e-27   NR KAF9763186.1 83296 g15027 i0 67.1 0.948 79 26 94.8 0 250 14 544 622 KAF9763186.1 putative trehalose-phosphatase [Nosema granulosis] diamond 237 115 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema granulosis
27499348 27499348 PRJNA942359_P_NODE_14883_length_250_cov_0.881356_g14768_i0 PRJNA942359 14883 250 0.881356 2.20339 Nosema granulosis 83296 Fungi Fungi 145 2.64e-38   NR KAF9763467.1 83296 g14768 i0 85.5 0.996 83 12 99.6 0 249 1 608 690 KAF9763467.1 Ribonucleoside-diphosphate reductase large chain [Nosema granulosis] diamond 249 145 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema granulosis
27972868 27972868 PRJNA942359_P_NODE_17685_length_246_cov_0.901734_g17570_i0 PRJNA942359 17685 246 0.901734 2.21826564 Nosema bombycis CQ1 578461 Fungi Fungi 122 2.22e-31   NR EOB13726.1 578461 g17570 i0 92.9 0.853658536585366 70 4 85.4 1 244 35 269 337 EOB13726.1 Putative methyltransferase NSUN5 [Nosema bombycis CQ1] diamond 210 122 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
28288428 28288428 PRJNA942359_P_NODE_9426_length_287_cov_0.803738_g9311_i0 PRJNA942359 9426 287 0.803738 2.30672806 Pancytospora philotis 1923975 Fungi Fungi 77 4.22e-16   NR KAI4291603.1 1923975 g9311 i0 38.8 1.76655052264808 85 51 88.9 1 268 14 4 87 KAI4291603.1 glutaredoxin 3 [Pancytospora philotis] diamond 507 77 1 Eukaryota Opisthokonta Fungi Microsporidia       Pancytospora Pancytospora philotis
29078093 29078093 PRJNA942359_P_NODE_12208_length_259_cov_1.537634_g12093_i0 PRJNA942359 12208 259 1.537634 3.98247206 Encephalitozoon intestinalis ATCC 5 58839 Fungi Fungi 78.2 1.49e-15   NR XP_003073460.1 876142 g12093 i0 41.9 0.996138996138996 86 49 98.5 1 255 1 9 94 XP_003073460.1 uncharacterized protein Eint_081680 [Encephalitozoon intestinalis ATCC 50506] diamond 258 78.2 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon intestinalis
29488218 29488218 PRJNA942359_P_NODE_8990_length_291_cov_1.279817_g8875_i0 PRJNA942359 8990 291 1.279817 3.72426747 Nosema bombycis CQ1 578461 Fungi Fungi 176 3.02e-49   NR EOB13243.1 578461 g8875 i0 95.5 0.917525773195876 89 4 91.8 0 290 24 690 778 EOB13243.1 M1 family aminopeptidase 1 [Nosema bombycis CQ1] diamond 267 176 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
29898998 29898998 PRJNA942359_P_NODE_13091_length_253_cov_0.866667_g12976_i0 PRJNA942359 13091 253 0.866667 2.19266751 Pseudoloma neurophilia 146866 Fungi Fungi 157 3.55e-46   NR KRH95105.1 146866 g12976 i0 100 0.936758893280632 79 0 93.7 0 17 253 1 79 KRH95105.1 Transcription factor E2F/dimerization partner (TDP) [Pseudoloma neurophilia] diamond 237 157 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
30088412 30088412 PRJNA942359_P_NODE_6812_length_326_cov_0.909091_g6697_i0 PRJNA942359 6812 326 0.909091 2.96363666 Encephalitozoon intestinalis ATCC 5 58839 Fungi Fungi 104 2.3599999999999997e-25   NR XP_003073460.1 876142 g6697 i0 52.3 0.809815950920245 88 42 81 0 322 59 45 132 XP_003073460.1 uncharacterized protein Eint_081680 [Encephalitozoon intestinalis ATCC 50506] diamond 264 104 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon intestinalis
30214659 30214659 PRJNA942359_P_NODE_16072_length_248_cov_0.891429_g15957_i0 PRJNA942359 16072 248 0.891429 2.21074392 Encephalitozoon hellem ATCC 5 27973 Fungi Fungi 111 1.38e-29   NR XP_003887683.1 907965 g15957 i0 72 0.991935483870968 82 23 99.2 0 3 248 8 89 XP_003887683.1 60S ribosomal protein L35 [Encephalitozoon hellem ATCC 50504] diamond 246 111 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon hellem
30348562 30348562 PRJNA942359_P_NODE_16172_length_248_cov_0.891429_g16057_i0 PRJNA942359 16172 248 0.891429 2.21074392 Encephalitozoon 6033 Fungi Fungi 69.7 1.88e-12   NR XP_003073168.1 876142 g16057 i0 48.1 1.97177419354839 81 33 98 2 248 6 20 91 XP_003073168.1 uncharacterized protein Eint_070440 [Encephalitozoon intestinalis ATCC 50506] diamond 489 69.7 1 Eukaryota Opisthokonta Fungi Microsporidia     Unikaryonidae Encephalitozoon Encephalitozoon intestinalis
31068099 31068099 PRJNA942359_P_NODE_15295_length_249_cov_1.539773_g15180_i0 PRJNA942359 15295 249 1.539773 3.83403477 Nosema bombycis CQ1 578461 Fungi Fungi 96.3 1.06e-23   NR EOB11505.1 578461 g15180 i0 100 0.602409638554217 50 0 60.2 0 248 99 4 53 EOB11505.1 hypothetical protein NBO_1116g0003 [Nosema bombycis CQ1] diamond 150 96.3 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
32364922 32364922 PRJNA942359_P_NODE_15379_length_249_cov_0.886364_g15264_i0 PRJNA942359 15379 249 0.886364 2.20704636 Nosema granulosis 83296 Fungi Fungi 103 5.24e-24   NR KAF9763179.1 83296 g15264 i0 61.5 0.939759036144578 78 29 94 1 237 4 199 275 KAF9763179.1 Solute carrier family 2, facilitated glucose transporter member 3 [Nosema granulosis] diamond 234 103 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema granulosis
32680339 32680339 PRJNA942359_P_NODE_4560_length_383_cov_1.438710_g4445_i0 PRJNA942359 4560 383 1.43871 5.5102593 Nosema bombycis CQ1 578461 Fungi Fungi 48.5 3.81e-4   NR EOB11563.1 578461 g4445 i0 93.3 0.234986945169713 30 1 22.7 1 102 16 58 87 EOB11563.1 hypothetical protein NBO_1058g0001 [Nosema bombycis CQ1] diamond 90 48.5 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis
32900887 32900887 PRJNA942359_P_NODE_15520_length_249_cov_0.886364_g15405_i0 PRJNA942359 15520 249 0.886364 2.20704636 Nosema bombycis CQ1 578461 Fungi Fungi 121 3.78e-30   NR EOB12162.1 578461 g15405 i0 73.2 0.987951807228916 82 22 98.8 0 1 246 195 276 EOB12162.1 ATP-binding cassette sub-family B member 7, mitochondrial, partial [Nosema bombycis CQ1] diamond 246 121 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Nosema Nosema bombycis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;