RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA942359", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Kitrinoviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA942359 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2198381 2198381 PRJNA942359_P_NODE_2642_length_483_cov_1.546341_g2528_i0 PRJNA942359 2642 483 1.546341 7.46882703 Hepelivirales sp. 2809460 Viruses Viruses 667 0   NTclustered gi|2416689985|gb|OP699142.1| 2809460 g2528 i0 91.684 0.995859213250518 481 40 99 0 3 483 5435 5915 Hepelivirales sp. strain MR233-17E/1088 nonstructural polyprotein gene, partial cds; and hypothetical protein gene, complete cds blastn 481 667 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales     Hepelivirales sp.
13676700 13676700 PRJNA942359_P_NODE_19511_length_243_cov_0.917647_g19396_i0 PRJNA942359 19511 243 0.917647 2.22988221 Tetranychus urticae kitavirus 2712692 Viruses Viruses 438 1.4399999999999996e-118   NTclustered gi|2814829584|gb|PQ360876.1| 2712692 g19396 i0 99.177 1 243 2 100 0 1 243 3444 3202 Tetranychus urticae kitavirus isolate TuKV_YN, complete genome blastn 243 438 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Kitaviridae   Tetranychus urticae kitavirus
14950791 14950791 PRJNA942359_P_NODE_10132_length_279_cov_1.893204_g10017_i0 PRJNA942359 10132 279 1.893204 5.28203916 Hepelivirales sp. 2809460 Viruses Viruses 361 3.76e-95   NTclustered gi|2416689985|gb|OP699142.1| 2809460 g10017 i0 89.964 1 279 28 100 0 1 279 2047 1769 Hepelivirales sp. strain MR233-17E/1088 nonstructural polyprotein gene, partial cds; and hypothetical protein gene, complete cds blastn 279 361 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales     Hepelivirales sp.
21325238 21325238 PRJNA942359_P_NODE_7677_length_311_cov_0.983193_g7562_i0 PRJNA942359 7677 311 0.983193 3.05773023 Hepelivirales sp. 2809460 Viruses Viruses 459 1.47e-124   NTclustered gi|2416689985|gb|OP699142.1| 2809460 g7562 i0 93.248 1 311 21 100 0 1 311 4998 5308 Hepelivirales sp. strain MR233-17E/1088 nonstructural polyprotein gene, partial cds; and hypothetical protein gene, complete cds blastn 311 459 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Hepelivirales     Hepelivirales sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;