RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA942359" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA942359 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6026008 6026008 PRJNA942359_P_NODE_11425_length_266_cov_2.528497_g11310_i0 PRJNA942359 11425 266 2.528497 6.72580202 Vexillifera fluvialis 1105343 Discosea other_Eukaryota 425 1.24e-114   NTclustered gi|354720323|gb|HQ687482.1| 1105343 g11310 i0 95.506 3.03007518796993 267 11 100 1 1 266 301 35 Vexillifera fluvialis strain RR1 small subunit ribosomal RNA gene, partial sequence blastn 806 425 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Vexilliferidae Vexillifera Vexillifera fluvialis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;