RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA942359" and tax_phylum = "Candidatus Saccharimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA942359 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5087158 5087158 PRJNA942359_P_NODE_5304_length_360_cov_2.038328_g5189_i0 PRJNA942359 5304 360 2.038328 7.3379808 Bacteria 2 Bacteria Bacteria 643 4.429999999999998e-180   NTclustered gi|837350690|gb|CP011211.1| 1619070 g5189 i0 99.16 124.941666666667 357 3 99 0 4 360 852286 851930 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 44979 643 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
32270016 32270016 PRJNA942359_P_NODE_20338_length_242_cov_0.869822_g20223_i0 PRJNA942359 20338 242 0.869822 2.10496924 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 123 7.77e-35   NR HSX78364.1 2890869 g20223 i0 82.6 0.855371900826446 69 12 85.5 0 24 230 3 71 HSX78364.1 hypothetical protein [Candidatus Saccharimonadia bacterium] diamond 207 123 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;