RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA942359", tax_kingdom = "Metazoa" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA942359 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26645189 26645189 PRJNA942359_P_NODE_17521_length_246_cov_0.901734_g17406_i0 PRJNA942359 17521 246 0.901734 2.21826564 Sycon ciliatum 27933 Porifera other_Eukaryota 45.4 0.00438   NR XP_065188263.1 27933 g17406 i0 54.8 1.89024390243902 31 14 37.8 0 240 148 102 132 XP_065188263.1 skin secretory protein xP2-like [Sycon ciliatum] diamond 465 45.4 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
29810835 29810835 PRJNA942359_P_NODE_14411_length_251_cov_0.876404_g14296_i0 PRJNA942359 14411 251 0.876404 2.19977404 Opisthokonta 33154 Porifera other_Eukaryota 122 3.8299999999999996e-32   NR AAP49566.1 86007 g14296 i0 62.7 53.605577689243 83 31 99.2 0 3 251 87 169 AAP49566.1 elongation factor 2, partial [Suberites ficus] diamond 13455 123 0.991869918699187 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Suberitidae Suberites Suberites ficus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;