RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA942359", tax_kingdom = "Metazoa" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA942359 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11462651 11462651 PRJNA942359_P_NODE_3289_length_438_cov_2.583562_g3174_i0 PRJNA942359 3289 438 2.583562 11.31600156 Metazoa 33208 Platyhelminthes Platyhelminthes 809 0   NTclustered gi|60687563|gb|AY914894.1| 6182 g3174 i0 100 100 438 0 100 0 1 438 119 556 Schistosoma japonicum unknown mRNA blastn 43800 809 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
16225898 16225898 PRJNA942359_P_NODE_17033_length_247_cov_0.896552_g16918_i0 PRJNA942359 17033 247 0.896552 2.21448344 Sluysia triapertura 2039861 Platyhelminthes Platyhelminthes 128 3.61e-25   NTclustered gi|1246719163|gb|MF383122.1| 2039861 g16918 i0 77.049 1.97570850202429 244 43 98 10 3 244 1278 1046 Sluysia triapertura isolate MR1645 28S ribosomal RNA gene, partial sequence blastn 488 128 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Uteriporidae Sluysia Sluysia triapertura

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;