contig_metadata
5 rows where bioproject = "PRJNA942359", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3473647 | 3473647 | PRJNA942359_P_NODE_1123_length_724_cov_2.062980_g1019_i0 | PRJNA942359 | 1123 | 724 | 2.06298 | 14.9359752 | Capsulimonas corticalis | 2219043 | Bacteria | Bacteria | 326 | 3.87e-84 | NTclustered | gi|2240447379|dbj|AP025739.1| | 2219043 | g1019 | i0 | 81.368 | 292.761049723757 | 424 | 57 | 58 | 14 | 1 | 413 | 594789 | 595201 | Capsulimonas corticalis AX-7 DNA, complete genome | blastn | 211959 | 326 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadia | Capsulimonadales | Capsulimonadaceae | Capsulimonas | Capsulimonas corticalis | ||
| 8911724 | 8911724 | PRJNA942359_P_NODE_9687_length_284_cov_1.246445_g9572_i0 | PRJNA942359 | 9687 | 284 | 1.246445 | 3.5399038 | Bacteria | 2 | Bacteria | Bacteria | 115 | 2.94e-29 | NR | MDQ2799150.1 | 2033014 | g9572 | i0 | 54.3 | 4.96478873239437 | 94 | 43 | 99.3 | 0 | 2 | 283 | 10 | 103 | MDQ2799150.1 hypothetical protein [Armatimonadota bacterium] | diamond | 1410 | 115 | 1 | Bacteria | Bacillati | Armatimonadota | Armatimonadota bacterium | ||||||
| 9850837 | 9850837 | PRJNA942359_P_NODE_10448_length_276_cov_1.536946_g10333_i0 | PRJNA942359 | 10448 | 276 | 1.536946 | 4.24197096 | uncultured Armatimonadetes bacterium | 157466 | Bacteria | Bacteria | 239 | 1.82e-58 | NTclustered | gi|2874254000|emb|OY970325.1| | 157466 | g10333 | i0 | 82.734 | 74.1847826086957 | 278 | 38 | 99 | 8 | 5 | 276 | 1304654 | 1304927 | MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 | blastn | 20475 | 239 | 1 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 20049798 | 20049798 | PRJNA942359_P_NODE_9936_length_281_cov_1.500000_g9821_i0 | PRJNA942359 | 9936 | 281 | 1.5 | 4.215 | uncultured Armatimonadetes bacterium | 157466 | Bacteria | Bacteria | 267 | 8.5e-67 | NTclustered | gi|2874254000|emb|OY970325.1| | 157466 | g9821 | i0 | 87.19 | 243.697508896797 | 242 | 22 | 85 | 8 | 43 | 280 | 1305365 | 1305129 | MAG: uncultured Armatimonadetes bacterium isolate MFD05942.bin.1.84 genome assembly, chromosome: 1 | blastn | 68479 | 267 | 1 | Bacteria | Bacillati | Armatimonadota | uncultured Armatimonadetes bacterium | ||||||
| 28288425 | 28288425 | PRJNA942359_P_NODE_17466_length_246_cov_0.901734_g17351_i0 | PRJNA942359 | 17466 | 246 | 0.901734 | 2.21826564 | Fimbriimonadales bacterium | 2682145 | Bacteria | Bacteria | 103 | 7.62e-25 | NR | MBV6503147.1 | 2682145 | g17351 | i0 | 100 | 0.51219512195122 | 42 | 0 | 51.2 | 0 | 246 | 121 | 210 | 251 | MBV6503147.1 Endonuclease III [Fimbriimonadales bacterium] | diamond | 126 | 103 | 1 | Bacteria | Bacillati | Armatimonadota | Fimbriimonadia | Fimbriimonadales | Fimbriimonadales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;