RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA942359", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA942359 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14951127 14951127 PRJNA942359_P_NODE_9752_length_283_cov_1.485714_g9637_i0 PRJNA942359 9752 283 1.485714 4.20457062 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 154 6.96e-33   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g9637 i0 85.43 53.1024734982332 151 19 53 3 1 150 2938 2790 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 15028 154 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
17501246 17501246 PRJNA942359_P_NODE_3394_length_433_cov_1.094444_g3279_i0 PRJNA942359 3394 433 1.094444 4.73894252 Cercomonas sp. 1979794 SAR_Eukaryotes SAR_Eukaryotes 470 9.74e-128   NTclustered gi|2651357797|gb|PP174310.1| 1979794 g3279 i0 86.374 99.5011547344111 433 55 99 4 5 433 3893 3461 Cercomonas sp. isolate 1-1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 43084 470 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;