RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA942359", tax_clade = "Sar" and tax_phylum = "Apicomplexa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA942359 · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
922932 922932 PRJNA942359_P_NODE_17201_length_247_cov_0.833333_g17086_i0 PRJNA942359 17201 247 0.833333 2.05833251 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 329 9.21e-86   NTclustered gi|820695469|tpe|LN714488.1| 572307 g17086 i0 91.02 28.5182186234818 245 20 100 2 3 247 300353 300595 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 7044 329 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
4751268 4751268 PRJNA942359_P_NODE_13524_length_252_cov_1.206704_g13409_i0 PRJNA942359 13524 252 1.206704 3.04089408 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 455 1.49e-123   NTclustered gi|820695469|tpe|LN714488.1| 572307 g13409 i0 99.206 25.5753968253968 252 2 100 0 1 252 300053 300304 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 6445 455 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
8576114 8576114 PRJNA942359_P_NODE_9927_length_281_cov_1.500000_g9812_i0 PRJNA942359 9927 281 1.5 4.215 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 339 1.78e-88   NTclustered gi|820695469|tpe|LN714488.1| 572307 g9812 i0 90.038 11.2989323843416 261 26 100 0 1 261 157575 157315 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 3175 339 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
12402229 12402229 PRJNA942359_P_NODE_5390_length_358_cov_1.077193_g5275_i0 PRJNA942359 5390 358 1.077193 3.85635094 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 499 1.01e-136   NTclustered gi|820695469|tpe|LN714488.1| 572307 g5275 i0 92.113 45.3854748603352 355 27 99 1 3 357 300715 300362 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 16248 499 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
17501335 17501335 PRJNA942359_P_NODE_8374_length_300_cov_0.894273_g8259_i0 PRJNA942359 8374 300 0.894273 2.682819 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 366 8.77e-97   NTclustered gi|820695469|tpe|LN714488.1| 572307 g8259 i0 88.667 27.3233333333333 300 34 100 0 1 300 116165 116464 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 8197 366 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
18774916 18774916 PRJNA942359_P_NODE_8415_length_299_cov_1.066372_g8300_i0 PRJNA942359 8415 299 1.066372 3.18845228 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 481 2.99e-131   NTclustered gi|820695469|tpe|LN714488.1| 572307 g8300 i0 95.652 4.89966555183946 299 13 100 0 1 299 117510 117808 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 1465 481 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
20049799 20049799 PRJNA942359_P_NODE_9996_length_281_cov_0.769231_g9881_i0 PRJNA942359 9996 281 0.769231 2.16153911 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 431 2.85e-116   NTclustered gi|820695469|tpe|LN714488.1| 572307 g9881 i0 94.604 45.8078291814947 278 15 100 0 1 278 299905 299628 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 12872 431 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
26803619 26803619 PRJNA942359_P_NODE_17641_length_246_cov_0.901734_g17526_i0 PRJNA942359 17641 246 0.901734 2.21826564 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 59.3 4.86e-8   NR XP_013233079.1 5802 g17526 i0 30.4 0.963414634146341 79 52 92.7 1 233 6 238 316 XP_013233079.1 vacuolar protein sorting-associated protein, putative [Eimeria tenella] diamond 237 59.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;