contig_metadata
16 rows where bioproject = "PRJNA942359", tax_clade = "PVC group" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 923111 | 923111 | PRJNA942359_P_NODE_7261_length_317_cov_1.729508_g7146_i0 | PRJNA942359 | 7261 | 317 | 1.729508 | 5.48254036 | Sulfuriroseicoccus oceanibius | 2707525 | Bacteria | Bacteria | 322 | 2.05e-83 | NTclustered | gi|1953472588|gb|CP066776.1| | 2707525 | g7146 | i0 | 87.589 | 278.81072555205 | 282 | 29 | 88 | 6 | 5 | 284 | 1634431 | 1634708 | Sulfuriroseicoccus oceanibius strain T37 chromosome, complete genome | blastn | 88383 | 322 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Sulfuriroseicoccus | Sulfuriroseicoccus oceanibius | |
| 2198294 | 2198294 | PRJNA942359_P_NODE_17482_length_246_cov_0.901734_g17367_i0 | PRJNA942359 | 17482 | 246 | 0.901734 | 2.21826564 | Chthoniobacteraceae bacterium | 2811408 | Bacteria | Bacteria | 200 | 7.5e-47 | NTclustered | gi|2813917447|gb|CP170506.1| | 2811408 | g17367 | i0 | 81.377 | 76.0040650406504 | 247 | 44 | 100 | 2 | 1 | 246 | 3139204 | 3138959 | MAG: Chthoniobacteraceae bacterium isolate SH-KS-3 chromosome, complete genome | blastn | 18697 | 200 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacteraceae bacterium | ||
| 2198438 | 2198438 | PRJNA942359_P_NODE_5882_length_346_cov_0.934066_g5767_i0 | PRJNA942359 | 5882 | 346 | 0.934066 | 3.23186836 | uncultured Verrucomicrobiales bacterium | 100234 | Bacteria | Bacteria | 579 | 1.2199999999999999e-160 | NTclustered | gi|220682226|gb|FJ542833.1| | 100234 | g5767 | i0 | 97.093 | 97.0924855491329 | 344 | 9 | 99 | 1 | 4 | 346 | 1 | 344 | Uncultured Verrucomicrobiales bacterium clone A03-04A 16S ribosomal RNA gene, partial sequence | blastn | 33594 | 579 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | uncultured Verrucomicrobiales bacterium | |||
| 2198485 | 2198485 | PRJNA942359_P_NODE_8442_length_298_cov_2.248889_g8327_i0 | PRJNA942359 | 8442 | 298 | 2.248889 | 6.70168922 | Chthoniobacter flavus | 191863 | Bacteria | Bacteria | 457 | 5.02e-124 | NTclustered | gi|183579828|emb|AM905425.1| | 497964 | g8327 | i0 | 94.295 | 263.694630872483 | 298 | 17 | 100 | 0 | 1 | 298 | 2220 | 1923 | Chthoniobacter flavus 23S rRNA gene, strain Ellin428 | blastn | 78581 | 457 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus | |
| 3473967 | 3473967 | PRJNA942359_P_NODE_9663_length_284_cov_1.464455_g9548_i0 | PRJNA942359 | 9663 | 284 | 1.464455 | 4.1590522 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 414 | 2.8999999999999993e-111 | NTclustered | gi|2874253793|emb|OY969777.1| | 412056 | g9548 | i0 | 93.286 | 102.961267605634 | 283 | 16 | 99 | 2 | 3 | 284 | 2365614 | 2365334 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01689.bin.c.1 genome assembly, chromosome: 1 | blastn | 29241 | 414 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4751371 | 4751371 | PRJNA942359_P_NODE_18444_length_245_cov_0.906977_g18329_i0 | PRJNA942359 | 18444 | 245 | 0.906977 | 2.22209365 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 79 | 6.88e-15 | NR | HYJ06632.1 | 2201154 | g18329 | i0 | 94.7 | 0.46530612244898 | 38 | 2 | 46.5 | 0 | 245 | 132 | 908 | 945 | HYJ06632.1 zinc-dependent metalloprotease family protein [Chthoniobacterales bacterium] | diamond | 114 | 79 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 6026320 | 6026320 | PRJNA942359_P_NODE_8705_length_294_cov_1.411765_g8590_i0 | PRJNA942359 | 8705 | 294 | 1.411765 | 4.1505891 | Luteolibacter ambystomatis | 2824561 | Bacteria | Bacteria | 230 | 1.1699999999999995e-55 | NTclustered | gi|2029343589|gb|CP073100.1| | 2824561 | g8590 | i0 | 80.952 | 138.139455782313 | 294 | 52 | 100 | 2 | 1 | 294 | 276718 | 276429 | Luteolibacter ambystomatis strain 32A chromosome, complete genome | blastn | 40613 | 230 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter ambystomatis | |
| 9850849 | 9850849 | PRJNA942359_P_NODE_11008_length_270_cov_1.741117_g10893_i0 | PRJNA942359 | 11008 | 270 | 1.741117 | 4.7010159 | Candidatus Xiphinematobacter sp. | 1903058 | Bacteria | Bacteria | 313 | 1.03e-80 | NTclustered | gi|1966854496|gb|CP068475.1| | 1903058 | g10893 | i0 | 87.591 | 117.974074074074 | 274 | 28 | 99 | 6 | 1 | 269 | 914980 | 915252 | MAG: Candidatus Xiphinematobacter sp. isolate P21 chromosome, complete genome | blastn | 31853 | 313 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Candidatus Xiphinematobacter | Candidatus Xiphinematobacter sp. | |||
| 14950990 | 14950990 | PRJNA942359_P_NODE_2172_length_530_cov_4.426696_g2058_i0 | PRJNA942359 | 2172 | 530 | 4.426696 | 23.4614888 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 723 | 0 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g2058 | i0 | 91.635 | 231.905660377358 | 526 | 38 | 99 | 5 | 1 | 523 | 15386 | 15908 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 122910 | 723 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 18774798 | 18774798 | PRJNA942359_P_NODE_2275_length_519_cov_2.609865_g2161_i0 | PRJNA942359 | 2275 | 519 | 2.609865 | 13.54519935 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 536 | 1.15e-147 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g2161 | i0 | 85.413 | 168.329479768786 | 521 | 70 | 99 | 6 | 2 | 519 | 2749400 | 2749917 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 87363 | 536 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 20049444 | 20049444 | PRJNA942359_P_NODE_10396_length_277_cov_1.147059_g10281_i0 | PRJNA942359 | 10396 | 277 | 1.147059 | 3.17735343 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 462 | 9.929999999999999e-126 | NTclustered | gi|2874253952|emb|OY970277.1| | 412056 | g10281 | i0 | 96.751 | 142.812274368231 | 277 | 9 | 100 | 0 | 1 | 277 | 2748362 | 2748638 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04580.bin.1.45 genome assembly, chromosome: 1 | blastn | 39559 | 462 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21661112 | 21661112 | PRJNA942359_P_NODE_6957_length_323_cov_1.560000_g6842_i0 | PRJNA942359 | 6957 | 323 | 1.56 | 5.0388 | Akkermansia | 239934 | Bacteria | Bacteria | 307 | 5.860000000000001e-79 | NTclustered | gi|2051350654|gb|CP072036.1| | 2927224 | g6842 | i0 | 84.146 | 301.120743034056 | 328 | 41 | 100 | 11 | 1 | 323 | 334721 | 335042 | Akkermansia massiliensis strain Akk1573 chromosome, complete genome | blastn | 97262 | 307 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia massiliensis | |
| 22600103 | 22600103 | PRJNA942359_P_NODE_398_length_1144_cov_2.156863_g336_i0 | PRJNA942359 | 398 | 1144 | 2.156863 | 24.67451272 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 1110 | 0 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g336 | i0 | 84.582 | 249.917832167832 | 1148 | 146 | 99 | 22 | 2 | 1144 | 1346 | 2467 | Luteolibacter sp. SL250 chromosome | blastn | 285906 | 1110 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 28926855 | 28926855 | PRJNA942359_P_NODE_18228_length_245_cov_0.906977_g18113_i0 | PRJNA942359 | 18228 | 245 | 0.906977 | 2.22209365 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 131 | 1.68e-33 | NR | MEA3186286.1 | 2510640 | g18113 | i0 | 83.8 | 6.86938775510204 | 80 | 10 | 98 | 2 | 240 | 1 | 487 | 563 | MEA3186286.1 formate dehydrogenase beta subunit [Chthoniobacter sp.] | diamond | 1683 | 131 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter sp. | |
| 29519909 | 29519909 | PRJNA942359_P_NODE_18170_length_245_cov_0.906977_g18055_i0 | PRJNA942359 | 18170 | 245 | 0.906977 | 2.22209365 | Verrucomicrobiota bacterium | 2026799 | Bacteria | Bacteria | 115 | 7.15e-28 | NR | MEW6304817.1 | 2026799 | g18055 | i0 | 72.8 | 1.97142857142857 | 81 | 18 | 99.2 | 2 | 245 | 3 | 117 | 193 | MEW6304817.1 DUF2514 family protein [Verrucomicrobiota bacterium] | diamond | 483 | 115 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31486000 | 31486000 | PRJNA942359_P_NODE_19236_length_243_cov_0.917647_g19121_i0 | PRJNA942359 | 19236 | 243 | 0.917647 | 2.22988221 | Bacteria | 2 | Bacteria | Bacteria | 81.3 | 8.81e-16 | NR | MSU68344.1 | 2006848 | g19121 | i0 | 88.4 | 4.39506172839506 | 43 | 5 | 53.1 | 0 | 131 | 3 | 1 | 43 | MSU68344.1 sugar porter family MFS transporter [Opitutaceae bacterium] | diamond | 1068 | 81.6 | 0.996323529411765 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;