contig_metadata
16 rows where bioproject = "PRJNA942359", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 6026277 | 6026277 | PRJNA942359_P_NODE_6825_length_325_cov_2.678571_g6710_i0 | PRJNA942359 | 6825 | 325 | 2.678571 | 8.70535575 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 379 | 1.23e-100 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g6710 | i0 | 87.842 | 12.7076923076923 | 329 | 32 | 100 | 6 | 1 | 325 | 3043619 | 3043943 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 4130 | 379 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 8911718 | 8911718 | PRJNA942359_P_NODE_8687_length_294_cov_1.972851_g8572_i0 | PRJNA942359 | 8687 | 294 | 1.972851 | 5.80018194 | Gemmatimonas | 173479 | Bacteria | Bacteria | 403 | 6.5399999999999995e-108 | NTclustered | gi|470475286|ref|NR_076270.1| | 173480 | g8572 | i0 | 91.554 | 116.462585034014 | 296 | 19 | 100 | 5 | 1 | 294 | 835 | 544 | Gemmatimonas aurantiaca strain T-27 23S ribosomal RNA gene, complete sequence | blastn | 34240 | 403 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas aurantiaca | |
| 9851092 | 9851092 | PRJNA942359_P_NODE_4748_length_377_cov_1.812500_g4633_i0 | PRJNA942359 | 4748 | 377 | 1.8125 | 6.833125 | Gemmatimonas groenlandica | 2732249 | Bacteria | Bacteria | 366 | 1.1299999999999996e-96 | NTclustered | gi|1839994010|gb|CP053085.1| | 2732249 | g4633 | i0 | 84.474 | 98.5358090185676 | 380 | 49 | 99 | 10 | 1 | 376 | 1101539 | 1101912 | Gemmatimonas groenlandica strain TET16 chromosome, complete genome | blastn | 37148 | 366 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonas | Gemmatimonas groenlandica | |
| 12402149 | 12402149 | PRJNA942359_P_NODE_1990_length_554_cov_1.866944_g1876_i0 | PRJNA942359 | 1990 | 554 | 1.866944 | 10.34286976 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 697 | 0 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g1876 | i0 | 89.483 | 91.5018050541516 | 561 | 45 | 100 | 14 | 1 | 554 | 3043714 | 3043161 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 50692 | 697 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 16225979 | 16225979 | PRJNA942359_P_NODE_2573_length_489_cov_7.175481_g2459_i0 | PRJNA942359 | 2573 | 489 | 7.1754810000000004 | 35.08810209 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 601 | 3.78e-167 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g2459 | i0 | 88.956 | 67.2167689161554 | 498 | 39 | 100 | 15 | 1 | 489 | 3042810 | 3042320 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 32869 | 601 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 17501200 | 17501200 | PRJNA942359_P_NODE_19614_length_243_cov_0.917647_g19499_i0 | PRJNA942359 | 19614 | 243 | 0.917647 | 2.22988221 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 137 | 5.14e-36 | NR | MEO5567146.1 | 2026741 | g19499 | i0 | 86.3 | 0.987654320987654 | 80 | 11 | 98.8 | 0 | 242 | 3 | 241 | 320 | MEO5567146.1 endopeptidase La [Gemmatimonadaceae bacterium] | diamond | 240 | 137 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 18774631 | 18774631 | PRJNA942359_P_NODE_1335_length_669_cov_3.776846_g1227_i0 | PRJNA942359 | 1335 | 669 | 3.776846 | 25.26709974 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 1053 | 0 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g1227 | i0 | 95.089 | 140.919282511211 | 672 | 28 | 100 | 5 | 1 | 669 | 3042853 | 3043522 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 94275 | 1053 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 26930350 | 26930350 | PRJNA942359_P_NODE_11002_length_270_cov_1.893401_g10887_i0 | PRJNA942359 | 11002 | 270 | 1.893401 | 5.1121827 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 122 | 5.99e-33 | NR | MES3034888.1 | 2026742 | g10887 | i0 | 96.7 | 0.666666666666667 | 60 | 2 | 66.7 | 0 | 1 | 180 | 111 | 170 | MES3034888.1 FKBP-type peptidyl-prolyl cis-trans isomerase [Gemmatimonadota bacterium] | diamond | 180 | 122 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 27530799 | 27530799 | PRJNA942359_P_NODE_16683_length_247_cov_0.896552_g16568_i0 | PRJNA942359 | 16683 | 247 | 0.896552 | 2.21448344 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 123 | 2.03e-30 | NR | HEV2086599.1 | 2448054 | g16568 | i0 | 82.9 | 3.98380566801619 | 82 | 14 | 99.6 | 0 | 247 | 2 | 195 | 276 | HEV2086599.1 FtsX-like permease family protein [Gemmatimonadales bacterium] | diamond | 984 | 123 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 29621046 | 29621046 | PRJNA942359_P_NODE_15430_length_249_cov_0.886364_g15315_i0 | PRJNA942359 | 15430 | 249 | 0.886364 | 2.20704636 | FCB group | 1783270 | Bacteria | Bacteria | 43.1 | 0.0219 | NR | MEO5510353.1 | 2910168 | g15315 | i0 | 54.1 | 2.75903614457831 | 37 | 17 | 44.6 | 0 | 190 | 80 | 3 | 39 | MEO5510353.1 PH domain-containing protein [Longimicrobiales bacterium] | diamond | 687 | 43.5 | 0.990804597701149 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiales bacterium | |||
| 29772382 | 29772382 | PRJNA942359_P_NODE_12991_length_253_cov_0.866667_g12876_i0 | PRJNA942359 | 12991 | 253 | 0.866667 | 2.19266751 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 136 | 7e-38 | NR | HKH93282.1 | 2026741 | g12876 | i0 | 73.8 | 0.99604743083004 | 84 | 22 | 99.6 | 0 | 1 | 252 | 81 | 164 | HKH93282.1 hypothetical protein [Gemmatimonadaceae bacterium] | diamond | 252 | 136 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 30278385 | 30278385 | PRJNA942359_P_NODE_17832_length_246_cov_0.901734_g17717_i0 | PRJNA942359 | 17832 | 246 | 0.901734 | 2.21826564 | Longimicrobium sp. | 2029185 | Bacteria | Bacteria | 96.7 | 3.69e-21 | NR | HYW13097.1 | 2029185 | g17717 | i0 | 88.2 | 0.829268292682927 | 68 | 7 | 81.7 | 1 | 46 | 246 | 1 | 68 | HYW13097.1 glycoside hydrolase family 28 protein [Longimicrobium sp.] | diamond | 204 | 96.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Longimicrobiia | Longimicrobiales | Longimicrobiaceae | Longimicrobium | Longimicrobium sp. | |
| 30941709 | 30941709 | PRJNA942359_P_NODE_16134_length_248_cov_0.891429_g16019_i0 | PRJNA942359 | 16134 | 248 | 0.891429 | 2.21074392 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 135 | 1.1e-35 | NR | MFN2564625.1 | 2026741 | g16019 | i0 | 86.6 | 1.99596774193548 | 82 | 11 | 99.2 | 0 | 247 | 2 | 254 | 335 | MFN2564625.1 carboxypeptidase regulatory-like domain-containing protein [Gemmatimonadaceae bacterium] | diamond | 495 | 135 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 32301841 | 32301841 | PRJNA942359_P_NODE_19239_length_243_cov_0.917647_g19124_i0 | PRJNA942359 | 19239 | 243 | 0.917647 | 2.22988221 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 115 | 9.36e-28 | NR | HEV8362660.1 | 2026741 | g19124 | i0 | 80 | 0.987654320987654 | 80 | 16 | 98.8 | 0 | 3 | 242 | 704 | 783 | HEV8362660.1 ADOP family duplicated permease [Gemmatimonadaceae bacterium] | diamond | 240 | 115 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium | ||
| 32459813 | 32459813 | PRJNA942359_P_NODE_18239_length_245_cov_0.906977_g18124_i0 | PRJNA942359 | 18239 | 245 | 0.906977 | 2.22209365 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 104 | 3.5399999999999995e-24 | NR | HEY7529092.1 | 2026742 | g18124 | i0 | 67.9 | 2.97551020408163 | 81 | 26 | 99.2 | 0 | 243 | 1 | 106 | 186 | HEY7529092.1 DASS family sodium-coupled anion symporter [Gemmatimonadota bacterium] | diamond | 729 | 104 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 32624302 | 32624302 | PRJNA942359_P_NODE_19940_length_242_cov_0.923077_g19825_i0 | PRJNA942359 | 19940 | 242 | 0.923077 | 2.23384634 | Roseisolibacter | 2093335 | Bacteria | Bacteria | 65.9 | 6.88e-12 | NR | WP_284350720.1 | 2014610 | g19825 | i0 | 76.2 | 1.62396694214876 | 42 | 10 | 52.1 | 0 | 238 | 113 | 2 | 43 | WP_284350720.1 hypothetical protein [Roseisolibacter agri] | diamond | 393 | 65.9 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Roseisolibacter | Roseisolibacter agri |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;