RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA942359", tax_clade = "Cyanobacteriota/Melainabacteria group" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 3 ✖

bioproject 1

  • PRJNA942359 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4751498 4751498 PRJNA942359_P_NODE_6604_length_330_cov_1.194553_g6489_i0 PRJNA942359 6604 330 1.194553 3.9420249 Candidatus Melainabacteria bacterium MEL.A1 1899017 Bacteria Bacteria 486 7.19e-133   NTclustered gi|1079475020|gb|CP017245.1| 1899017 g6489 i0 93.313 304.718181818182 329 22 99 0 2 330 1478257 1477929 Candidatus Melainabacteria bacterium MEL.A1 chromosome, complete genome blastn 100557 486 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium MEL.A1
14951032 14951032 PRJNA942359_P_NODE_4432_length_387_cov_1.579618_g4317_i0 PRJNA942359 4432 387 1.579618 6.11312166 Candidatus Melainabacteria bacterium 2052166 Bacteria Bacteria 446 1.45e-120   NTclustered gi|2189472572|gb|CP091731.1| 2052166 g4317 i0 87.468 14.8863049095607 391 43 100 5 1 387 597041 597429 MAG: Candidatus Melainabacteria bacterium isolate nC33_lr_bin.1.fa chromosome blastn 5761 446 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria         Candidatus Melainabacteria bacterium
16225967 16225967 PRJNA942359_P_NODE_20633_length_229_cov_3.833333_g20518_i0 PRJNA942359 20633 229 3.833333 8.77833257 Candidatus Gastranaerophilales bacterium 2137880 Bacteria Bacteria 366 6.42e-97   NTclustered gi|2729058672|emb|OZ006972.1| 2137880 g20518 i0 96 146.205240174672 225 9 98 0 5 229 509867 510091 MAG: Candidatus Gastranaerophilales bacterium isolate metabat2_pooled_hifiasm.1023 MAG genome assembly, chromosome: 1 blastn 33481 366 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Gastranaerophilales     Candidatus Gastranaerophilales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;