RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA940501", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA940501 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27025199 27025199 PRJNA940501_S_NODE_4602_length_736_cov_9.756133_g4075_i0 PRJNA940501 4602 736 9.756133 71.80513888 African cichlid piscichuvirus 3065075 Viruses Viruses 124 2.2000000000000004e-28   NR WLN26256.1 3065075 g4075 i0 45.3 0.558423913043478 137 75 55.8 0 34 444 98 234 WLN26256.1 MAG: L protein, partial [African cichlid piscichuvirus] diamond 411 124 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus
27373216 27373216 PRJNA940501_S_NODE_46163_length_290_cov_8.720648_g45345_i0 PRJNA940501 46163 290 8.720648 25.2898792 African cichlid piscichuvirus 3065075 Viruses Viruses 66.6 2.72e-10   NR UVF58767.1 3065075 g45345 i0 46.8 0.817241379310345 79 41 80.7 1 1 234 4 82 UVF58767.1 MAG: L protein [Salarius guttatus piscichuvirus] diamond 237 66.6 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus African cichlid piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;