RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA940501" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA940501 · 5 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27189956 27189956 PRJNA940501_S_NODE_2662_length_1478_cov_24.508711_g2469_i0 PRJNA940501 2662 1478 24.508711 362.23874858 Bacillati 1783272 Bacteria Bacteria 89 1.32e-17   NR HEY5589137.1 2053589 g2469 i0 53.9 0.308525033829499 76 35 15.4 0 1222 1449 1 76 HEY5589137.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 456 89.7 0.992196209587514 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27246453 27246453 PRJNA940501_S_NODE_52943_length_281_cov_1.184874_g52125_i0 PRJNA940501 52943 281 1.184874 3.32949594 Minisyncoccota bacterium 2053589 Bacteria Bacteria 44.3 0.0151   NR MFA5080617.1 2053589 g52125 i0 35.6 0.779359430604982 73 43 77.9 1 274 56 99 167 MFA5080617.1 ATPase [Candidatus Paceibacterota bacterium] diamond 219 44.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27846337 27846337 PRJNA940501_S_NODE_13264_length_418_cov_2.336000_g12454_i0 PRJNA940501 13264 418 2.336 9.76448 Minisyncoccota bacterium 2053589 Bacteria Bacteria 149 5.25e-40   NR MDR3570663.1 2053589 g12454 i0 60.3 0.832535885167464 116 46 83.3 0 3 350 349 464 MDR3570663.1 beta-Ala-His dipeptidase [Candidatus Paceibacterota bacterium] diamond 348 149 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29425003 29425003 PRJNA940501_S_NODE_23209_length_348_cov_2.239344_g22391_i0 PRJNA940501 23209 348 2.239344 7.79291712 Minisyncoccota bacterium 2053589 Bacteria Bacteria 97.4 5.0099999999999997e-23   NR MDR3571063.1 2053589 g22391 i0 70 0.603448275862069 70 21 60.3 0 2 211 85 154 MDR3571063.1 prohibitin family protein [Candidatus Paceibacterota bacterium] diamond 210 97.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31036555 31036555 PRJNA940501_S_NODE_27655_length_331_cov_6.805556_g26837_i0 PRJNA940501 27655 331 6.805556 22.52639036 Minisyncoccota bacterium 2053589 Bacteria Bacteria 105 6.0700000000000006e-27   NR MDR3570671.1 2053589 g26837 i0 57.4 0.978851963746224 108 40 92.4 2 306 1 1 108 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 324 105 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;