RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA940501", tax_kingdom = "Orthornavirae" and tax_phylum = "Duplornaviricota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 4 ✖

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA940501 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13672008 13672008 PRJNA940501_S_NODE_157491_length_208_cov_1.775758_g156673_i0 PRJNA940501 157491 208 1.775758 3.69357664 Guangdong tick orbivirus 2998222 Viruses Viruses 52.8 0.018   NTclustered gi|2374021761|gb|OM264154.1| 2998222 g156673 i0 100 0.134615384615385 28 0 13 0 172 199 1914 1941 Guangdong tick orbivirus strain GD-2020 capping enzyme (VP4) gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Orbivirus Guangdong tick orbivirus
14945625 14945625 PRJNA940501_S_NODE_118992_length_226_cov_2.568306_g118174_i0 PRJNA940501 118992 226 2.568306 5.80437156 Guangdong tick orbivirus 2998222 Viruses Viruses 52.8 0.02   NTclustered gi|2374021761|gb|OM264154.1| 2998222 g118174 i0 100 0.123893805309735 28 0 12 0 196 223 1914 1941 Guangdong tick orbivirus strain GD-2020 capping enzyme (VP4) gene, complete cds blastn 28 52.8 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Orbivirus Guangdong tick orbivirus
17498416 17498416 PRJNA940501_S_NODE_280234_length_171_cov_2.734375_g279416_i0 PRJNA940501 280234 171 2.734375 4.67578125 Chemarfal virus 260 3063286 Viruses Viruses 222 1.03e-53   NTclustered gi|2626079958|gb|OR270550.1| 3063286 g279416 i0 94.444 0.842105263157895 144 8 84 0 1 144 144 1 MAG: Chemarfal virus 260 isolate ML188 genomic sequence blastn 144 222 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales     Chemarfal virus 260
30119836 30119836 PRJNA940501_S_NODE_252812_length_178_cov_1.392593_g251994_i0 PRJNA940501 252812 178 1.392593 2.47881554 Henan cystovirus 3 2824305 Viruses Viruses 74.7 6.1e-14   NR QYF49798.1 2824305 g251994 i0 62.1 0.97752808988764 58 22 97.8 0 3 176 153 210 QYF49798.1 MAG: hypothetical protein 2 [Henan cystovirus 3] diamond 174 74.7 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Cystovirus Henan cystovirus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;