RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA940501", tax_kingdom = "Heunggongvirae" and tax_phylum = "Peploviricota"

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tax_superkingdom 1

tax_phylum 1

  • Peploviricota · 2 ✖

tax_kingdom 1

  • Heunggongvirae · 2 ✖

bioproject 1

  • PRJNA940501 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10187036 10187036 PRJNA940501_S_NODE_40868_length_299_cov_6657.648438_g40050_i0 PRJNA940501 40868 299 6657.648438 19906.36882962 root 1 Root_unresolved Root_unresolved 119 2.7e-22   NTclustered gi|1893169343|gb|MT364888.1| 10310 g40050 i0 94.805 23.0468227424749 77 2 26 2 215 291 79 5 Human alphaherpesvirus 2, partial genome blastn 6891 119 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha2
17835810 17835810 PRJNA940501_S_NODE_53814_length_279_cov_153.572034_g52996_i0 PRJNA940501 53814 279 153.572034 428.46597486 Heunggongvirae 2731360 Viruses Viruses 71.3 7.09e-8   NTclustered gi|2086088741|gb|MT648647.1| 10376 g52996 i0 100 15.3584229390681 38 0 14 0 6 43 54171 54134 Human gammaherpesvirus 4 isolate Necker-6, partial genome blastn 4285 71.3 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;