RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA940501", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Margulisiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Margulisiibacteriota · 1 ✖

tax_kingdom 1

  • Bacillati · 1 ✖

bioproject 1

  • PRJNA940501 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27878099 27878099 PRJNA940501_S_NODE_40985_length_299_cov_3.511719_g40167_i0 PRJNA940501 40985 299 3.511719 10.50003981 Candidatus Margulisiibacteriota bacterium 2053573 Bacteria Bacteria 44.3 0.0206   NR HVO23349.1 2053573 g40167 i0 34.2 0.732441471571906 73 29 70.2 2 230 21 308 364 HVO23349.1 FUSC family protein [Candidatus Margulisiibacteriota bacterium] diamond 219 44.3 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Margulisiibacteriota         Candidatus Margulisiibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;