RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA940501", tax_clade = "Pithoviruses" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_clade 1

  • Pithoviruses · 2 ✖

bioproject 1

  • PRJNA940501 · 2 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6361143 6361143 PRJNA940501_S_NODE_105505_length_234_cov_2.214660_g104687_i0 PRJNA940501 105505 234 2.21466 5.1823044 Solumvirus sp. 2487773 Viruses Viruses 52.8 6.16e-6   NR AYV86227.1 2487773 g104687 i0 92.6 0.346153846153846 27 2 34.6 0 232 152 158 184 AYV86227.1 MAG: hypothetical protein Solumvirus2_34 [Solumvirus sp.] diamond 81 52.8 1 Viruses Pithoviruses             Solumvirus sp.
27972783 27972783 PRJNA940501_S_NODE_14085_length_408_cov_4.901370_g13272_i0 PRJNA940501 14085 408 4.90137 19.9975896 Pithovirus LCDPAC 2506600 Viruses Viruses 47.8 0.00231   NR QBK84707.1 2506600 g13272 i0 62.9 0.257352941176471 35 12 25 1 274 375 9 43 QBK84707.1 MAG: hypothetical protein LCDPAC01_01880 [Pithovirus LCDPAC01] diamond 105 47.8 1 Viruses Pithoviruses             Pithovirus LCDPAC01

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;