RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

20 rows where bioproject = "PRJNA940501" and tax_clade = "Metamonada"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 3

analysis 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 20 ✖

bioproject 1

  • PRJNA940501 · 20 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
917837 917837 PRJNA940501_S_NODE_131781_length_220_cov_1.327684_g130963_i0 PRJNA940501 131781 220 1.327684 2.9209048 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 79 1.78e-16   NR KAJ4462268.1 342808 g130963 i0 60.9 2.97272727272727 64 25 87.3 0 194 3 80 143 KAJ4462268.1 putative nucleolar and coiled-body phosphoprotein 1 [Paratrimastix pyriformis] diamond 654 79 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
20045335 20045335 PRJNA940501_S_NODE_179036_length_200_cov_1.445860_g178218_i0 PRJNA940501 179036 200 1.44586 2.89172 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 65.8 2.23e-6   NTclustered gi|2794971734|ref|XM_067872030.1| 2049356 g178218 i0 95.238 20.65 42 1 21 1 92 133 801 761 Monocercomonoides exilis uncharacterized protein (MONOS_2130), partial mRNA blastn 4130 65.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
20048298 20048298 PRJNA940501_S_NODE_57176_length_275_cov_3.689655_g56358_i0 PRJNA940501 57176 275 3.689655 10.14655125 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 52.8 0.025   NTclustered gi|2794896955|ref|XM_067912647.1| 135588 g56358 i0 100 0.101818181818182 28 0 10 0 224 251 2045 2072 Histomonas meleagridis uncharacterized protein (GO595_010015), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
27183065 27183065 PRJNA940501_S_NODE_382762_length_152_cov_1.293578_g381944_i0 PRJNA940501 382762 152 1.293578 1.96623856 Kipferlia bialata 797122 Fornicata other_Eukaryota 41.6 0.0277   NR GIQ83752.1 797122 g381944 i0 50 0.631578947368421 32 16 63.2 0 20 115 72 103 GIQ83752.1 hypothetical protein KIPB_005121 [Kipferlia bialata] diamond 96 41.6 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
27499310 27499310 PRJNA940501_S_NODE_387503_length_151_cov_1.305556_g386685_i0 PRJNA940501 387503 151 1.305556 1.97138956 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 42.7 0.0104   NR KAJ4460851.1 342808 g386685 i0 61.3 0.615894039735099 31 12 61.6 0 15 107 357 387 KAJ4460851.1 putative Enolase superfamily member [Paratrimastix pyriformis] diamond 93 42.7 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
28130808 28130808 PRJNA940501_S_NODE_208025_length_190_cov_2.387755_g207207_i0 PRJNA940501 208025 190 2.387755 4.5367345 Trichomonas vaginalis G3 412133 Parabasalia other_Eukaryota 41.2 0.012   NR XP_001580960.1 412133 g207207 i0 35 1.89473684210526 60 25 83.7 2 179 21 8 60 XP_001580960.1 hypothetical protein TVAGG3_0271840 [Trichomonas vaginalis G3] diamond 360 41.6 0.990384615384615 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Trichomonas Trichomonas vaginalis
28383224 28383224 PRJNA940501_S_NODE_30666_length_322_cov_4.197133_g29848_i0 PRJNA940501 30666 322 4.197133 13.51476826 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 45.4 0.00498   NR KAJ4462916.1 342808 g29848 i0 40.4 0.437888198757764 47 27 43.8 1 26 166 118 163 KAJ4462916.1 putative cytoplasmic protein [Paratrimastix pyriformis] diamond 141 45.4 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
28572695 28572695 PRJNA940501_S_NODE_395787_length_150_cov_1.757009_g394969_i0 PRJNA940501 395787 150 1.757009 2.6355135 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 77.4 1.27e-16   NR KAJ5079709.1 1746090 g394969 i0 71.4 2.94 49 14 98 0 149 3 76 124 KAJ5079709.1 60S ribosomal protein L31 [Anaeramoeba ignava] diamond 441 77.4 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
28636095 28636095 PRJNA940501_S_NODE_224987_length_185_cov_2.091549_g224169_i0 PRJNA940501 224987 185 2.091549 3.86936565 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 66.2 7.94e-12   NR KAJ4457659.1 342808 g224169 i0 59.6 0.843243243243243 52 21 84.3 0 4 159 95 146 KAJ4457659.1 hypothetical protein PAPYR_6797 [Paratrimastix pyriformis] diamond 156 66.2 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29015054 29015054 PRJNA940501_S_NODE_299908_length_167_cov_1.717742_g299090_i0 PRJNA940501 299908 167 1.717742 2.86862914 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 55.1 5.83e-7   NR KAJ4461860.1 342808 g299090 i0 41.8 2.64071856287425 55 32 98.8 0 1 165 337 391 KAJ4461860.1 putative tRNA-dihydrouridine synthase [Paratrimastix pyriformis] diamond 441 55.1 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29235831 29235831 PRJNA940501_S_NODE_17749_length_377_cov_2.110778_g16932_i0 PRJNA940501 17749 377 2.110778 7.95763306 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 87.8 2.83e-17   NR KAJ4459348.1 342808 g16932 i0 43.4 0.660477453580902 83 44 66 1 354 106 557 636 KAJ4459348.1 hypothetical protein PAPYR_4644 [Paratrimastix pyriformis] diamond 249 87.8 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29708945 29708945 PRJNA940501_S_NODE_159030_length_207_cov_5.463415_g158212_i0 PRJNA940501 159030 207 5.463415 11.30926905 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 77 1.86e-14   NR KAJ3433634.1 1746091 g158212 i0 58 3.85507246376812 69 27 97.1 1 5 205 453 521 KAJ3433634.1 copine [Anaeramoeba flamelloides] diamond 798 77 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
31225690 31225690 PRJNA940501_S_NODE_142515_length_215_cov_1.209302_g141697_i0 PRJNA940501 142515 215 1.209302 2.5999993 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 43.5 0.0142   NR KAJ5069913.1 1746090 g141697 i0 36.6 0.990697674418605 71 43 99.1 1 3 215 1563 1631 KAJ5069913.1 calpain [Anaeramoeba ignava] diamond 213 43.5 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
31320695 31320695 PRJNA940501_S_NODE_356755_length_156_cov_1.663717_g355937_i0 PRJNA940501 356755 156 1.663717 2.59539852 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 46.2 6.59e-4   NR KAJ4458583.1 342808 g355937 i0 58.8 1.25 34 14 65.4 0 154 53 117 150 KAJ4458583.1 putative NAD-dependent epimerase/dehydratase [Paratrimastix pyriformis] diamond 195 46.2 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
31359377 31359377 PRJNA940501_S_NODE_12776_length_424_cov_1.498688_g11967_i0 PRJNA940501 12776 424 1.498688 6.35443712 root 1 Root_unresolved Root_unresolved 54.3 2.2e-5   NR TNJ26365.1 5742 g11967 i0 63.2 1.07547169811321 38 14 26.9 0 8 121 401 438 TNJ26365.1 Ornithine decarboxylase [Giardia muris] diamond 456 54.7 0.992687385740402 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
31573962 31573962 PRJNA940501_S_NODE_258676_length_176_cov_4.593985_g257858_i0 PRJNA940501 258676 176 4.593985 8.0854136 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 60.1 1.15e-8   NR KAJ3426078.1 1746091 g257858 i0 49.1 4.5 53 26 90.3 1 12 170 220 271 KAJ3426078.1 copine [Anaeramoeba flamelloides] diamond 792 60.1 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
32206555 32206555 PRJNA940501_S_NODE_302398_length_167_cov_1.137097_g301580_i0 PRJNA940501 302398 167 1.137097 1.89895199 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 41.6 0.0348   NR GKT37173.1 2918883 g301580 i0 51.4 0.62874251497006 35 17 62.9 0 167 63 37 71 GKT37173.1 hypothetical protein ADUPG1_010013 [Aduncisulcus paluster] diamond 105 41.6 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
32491443 32491443 PRJNA940501_S_NODE_249019_length_179_cov_1.382353_g248201_i0 PRJNA940501 249019 179 1.382353 2.47441187 Giardia muris 5742 Fornicata other_Eukaryota 44.7 0.00328   NR TNJ28565.1 5742 g248201 i0 41.9 1.1731843575419 43 23 72.1 1 138 10 333 373 TNJ28565.1 RING finger domain-containing protein [Giardia muris] diamond 210 44.7 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Giardia Giardia muris
32586255 32586255 PRJNA940501_S_NODE_119779_length_226_cov_1.540984_g118961_i0 PRJNA940501 119779 226 1.540984 3.48262384 Hexamita inflata 28002 Fornicata other_Eukaryota 69.3 1.32e-11   NR CAK8776449.1 28002 g118961 i0 52.6 5.29646017699115 57 27 75.7 0 171 1 1638 1694 CAK8776449.1 HINF_030216 [Hexamita inflata] diamond 1197 69.3 1 Eukaryota Metamonada   Fornicata   Diplomonadida Hexamitidae Hexamita Hexamita inflata
32712040 32712040 PRJNA940501_S_NODE_90560_length_244_cov_3.273632_g89742_i0 PRJNA940501 90560 244 3.273632 7.98766208 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 52.4 1.46e-5   NR XP_068367999.1 1144522 g89742 i0 52.3 0.540983606557377 44 20 52.9 1 9 137 240 283 XP_068367999.1 uncharacterized protein TRFO_42868 [Tritrichomonas foetus] diamond 132 52.4 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;