RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA940501", tax_clade = "FCB group" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA940501 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27657266 27657266 PRJNA940501_S_NODE_400244_length_150_cov_0.878505_g399426_i0 PRJNA940501 400244 150 0.878505 1.3177575 Balneola sp. 2024824 Bacteria Bacteria 40.8 0.0499   NR MBK98570.1 2024824 g399426 i0 46.2 0.78 39 21 78 0 139 23 106 144 MBK98570.1 sulfatase [Balneola sp.] diamond 117 40.8 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola sp.
27878088 27878088 PRJNA940501_S_NODE_291245_length_169_cov_1.492063_g290427_i0 PRJNA940501 291245 169 1.492063 2.52158647 Fodinibius salicampi 1920655 Bacteria Bacteria 41.2 0.0454   NR WP_265789463.1 1920655 g290427 i0 40 0.621301775147929 35 21 62.1 0 10 114 120 154 WP_265789463.1 type 1 glutamine amidotransferase [Fodinibius salicampi] diamond 105 41.2 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Fodinibius Fodinibius salicampi
30941656 30941656 PRJNA940501_S_NODE_316634_length_164_cov_1.165289_g315816_i0 PRJNA940501 316634 164 1.165289 1.91107396 Gracilimonas sp. 1974203 Bacteria Bacteria 41.6 0.0195   NR MDZ7806900.1 1974203 g315816 i0 37.8 0.823170731707317 45 28 82.3 0 9 143 84 128 MDZ7806900.1 redoxin domain-containing protein [Gracilimonas sp.] diamond 135 41.6 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Gracilimonas Gracilimonas sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;