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contig_metadata

4 rows where bioproject = "PRJNA940501", tax_clade = "CRuMs" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 4 ✖

tax_clade 1

  • CRuMs · 4 ✖

bioproject 1

  • PRJNA940501 · 4 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2193723 2193723 PRJNA940501_S_NODE_154362_length_209_cov_2.975904_g153544_i0 PRJNA940501 154362 209 2.975904 6.21963936 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 58.4 3.94e-4   NTclustered gi|2733867141|gb|PP812520.1| 440571 g153544 i0 100 0.717703349282297 31 0 15 0 1 31 74 104 Uncultured Collodictyonidae isolate Col19 small subunit ribosomal RNA gene and internal transcribed spacer region, partial sequence blastn 150 58.4 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae
7298534 7298534 PRJNA940501_S_NODE_30786_length_322_cov_2.189964_g29968_i0 PRJNA940501 30786 322 2.189964 7.05168408 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 58.4 6.5e-4   NTclustered gi|2733867141|gb|PP812520.1| 440571 g29968 i0 100 0.453416149068323 31 0 10 0 292 322 104 74 Uncultured Collodictyonidae isolate Col19 small subunit ribosomal RNA gene and internal transcribed spacer region, partial sequence blastn 146 58.4 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae
16221285 16221285 PRJNA940501_S_NODE_153533_length_210_cov_1.353293_g152715_i0 PRJNA940501 153533 210 1.353293 2.8419153 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 56.5 0.001   NTclustered gi|2733867141|gb|PP812520.1| 440571 g152715 i0 100 0.69047619047619 30 0 14 0 181 210 103 74 Uncultured Collodictyonidae isolate Col19 small subunit ribosomal RNA gene and internal transcribed spacer region, partial sequence blastn 145 56.5 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae
20044648 20044648 PRJNA940501_S_NODE_13456_length_415_cov_9.341398_g12645_i0 PRJNA940501 13456 415 9.341398 38.7668017 uncultured Collodictyonidae 440571 Root_unresolved Root_unresolved 58.4 8.58e-4   NTclustered gi|2733867141|gb|PP812520.1| 440571 g12645 i0 100 0.351807228915663 31 0 7 0 1 31 74 104 Uncultured Collodictyonidae isolate Col19 small subunit ribosomal RNA gene and internal transcribed spacer region, partial sequence blastn 146 58.4 1 Eukaryota CRuMs         Collodictyonidae   uncultured Collodictyonidae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;