RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA940501", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA940501 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31422477 31422477 PRJNA940501_S_NODE_250016_length_179_cov_1.036765_g249198_i0 PRJNA940501 250016 179 1.036765 1.85580935 Bacteria 2 Bacteria Bacteria 97.8 8.119999999999999e-23   NR HIC01034.1 2026781 g249198 i0 76.3 4.94413407821229 59 14 98.9 0 178 2 102 160 HIC01034.1 Gfo/Idh/MocA family oxidoreductase [Candidatus Poribacteria bacterium] diamond 885 98.2 0.995926680244399 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
32269934 32269934 PRJNA940501_S_NODE_160118_length_207_cov_1.719512_g159300_i0 PRJNA940501 160118 207 1.719512 3.55938984 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 53.5 2.31e-6   NR MCH2575739.1 2026781 g159300 i0 71.4 1.52173913043478 35 10 50.7 0 179 75 188 222 MCH2575739.1 phosphoglycerate kinase [Candidatus Poribacteria bacterium] diamond 315 53.5 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;