RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA940501", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Falkowiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Falkowiibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA940501 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28541369 28541369 PRJNA940501_S_NODE_56467_length_276_cov_2.493562_g55649_i0 PRJNA940501 56467 276 2.493562 6.88223112 Candidatus Falkowbacteria bacterium RIFOXYC2_FULL_48_21 1798005 Bacteria Bacteria 41.6 0.035   NR OGF38047.1 1798005 g55649 i0 37.2 0.467391304347826 43 27 46.7 0 275 147 31 73 OGF38047.1 MAG: hypothetical protein A2482_00365 [Candidatus Falkowbacteria bacterium RIFOXYC2_FULL_48_21] diamond 129 41.6 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium RIFOXYC2_FULL_48_21
32680292 32680292 PRJNA940501_S_NODE_344180_length_158_cov_2.921739_g343362_i0 PRJNA940501 344180 158 2.921739 4.61634762 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 62 1.86e-9   NR QQG53011.1 2053554 g343362 i0 62.7 0.968354430379747 51 19 96.8 0 5 157 4663 4713 QQG53011.1 MAG: fibronectin type III domain-containing protein [Candidatus Falkowbacteria bacterium] diamond 153 62 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;