RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA940501", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Eiseniibacteriota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Eiseniibacteriota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA940501 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26961789 26961789 PRJNA940501_S_NODE_85622_length_248_cov_1.834146_g84804_i0 PRJNA940501 85622 248 1.834146 4.54868208 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 43.9 0.0147   NR HEV8479479.1 2212470 g84804 i0 33.8 0.931451612903226 77 48 93.1 1 15 245 242 315 HEV8479479.1 sugar phosphate nucleotidyltransferase [Candidatus Eiseniibacteriota bacterium] diamond 231 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium
31953327 31953327 PRJNA940501_S_NODE_74557_length_257_cov_2.462617_g73739_i0 PRJNA940501 74557 257 2.462617 6.32892569 Candidatus Eiseniibacteriota bacterium 2212470 Bacteria Bacteria 44.7 0.00904   NR MCU0612058.1 2212470 g73739 i0 43.1 0.75875486381323 65 30 67.7 4 22 195 159 223 MCU0612058.1 penicillin acylase family protein [Candidatus Eiseniibacteriota bacterium] diamond 195 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Eiseniibacteriota         Candidatus Eiseniibacteriota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;