RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA940501", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA940501 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28509592 28509592 PRJNA940501_S_NODE_27967_length_330_cov_4.958188_g27149_i0 PRJNA940501 27967 330 4.958188 16.3620204 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 44.3 0.00872   NR HEY7555287.1 2838779 g27149 i0 31.7 0.745454545454545 82 45 74.5 2 23 268 29 99 HEY7555287.1 ASCH domain-containing protein [Candidatus Binatia bacterium] diamond 246 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30214610 30214610 PRJNA940501_S_NODE_273052_length_173_cov_1.446154_g272234_i0 PRJNA940501 273052 173 1.446154 2.50184642 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 40.8 0.0485   NR HSE86184.1 2838779 g272234 i0 38.9 0.936416184971098 54 22 93.6 1 8 169 16 58 HSE86184.1 FAD binding domain-containing protein [Candidatus Binatia bacterium] diamond 162 40.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32617602 32617602 PRJNA940501_S_NODE_89980_length_245_cov_1.396040_g89162_i0 PRJNA940501 89980 245 1.39604 3.420298 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 44.3 0.0109   NR HWP22794.1 2838779 g89162 i0 31.1 0.746938775510204 61 35 66.1 1 212 51 498 558 HWP22794.1 phenylalanine--tRNA ligase subunit beta [Candidatus Binatia bacterium] diamond 183 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;