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contig_metadata

10 rows where bioproject = "PRJNA940501", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

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analysis 2

tax_superkingdom 1

  • Eukaryota · 10 ✖

tax_clade 1

  • Apusozoa · 10 ✖

bioproject 1

  • PRJNA940501 · 10 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2193226 2193226 PRJNA940501_S_NODE_12402_length_428_cov_6.446753_g11594_i0 PRJNA940501 12402 428 6.446753 27.59210284 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 181 2.5399999999999994e-54   NR XP_013754328.1 461836 g11594 i0 70.9 1.64018691588785 117 33 81.3 1 3 350 126 242 XP_013754328.1 60S ribosomal protein L7 [Thecamonas trahens ATCC 50062] diamond 702 181 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
14950156 14950156 PRJNA940501_S_NODE_90492_length_244_cov_4.388060_g89674_i0 PRJNA940501 90492 244 4.38806 10.7068664 Thecamonas trahens 529818 Root_unresolved Root_unresolved 97.1 1e-15   NTclustered gi|923131752|ref|XM_013903888.1| 461836 g89674 i0 82.301 2.81147540983607 113 18 46 2 1 112 405 516 Thecamonas trahens ATCC 50062 60S ribosomal protein (AMSG_04094), mRNA blastn 686 97.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
18769962 18769962 PRJNA940501_S_NODE_14895_length_400_cov_3.817927_g14081_i0 PRJNA940501 14895 400 3.817927 15.271708 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 150 1.3199999999999999e-31   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g14081 i0 89.744 28.475 117 12 29 0 239 355 5178 5294 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11390 150 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
22595324 22595324 PRJNA940501_S_NODE_15858_length_391_cov_4.135057_g15043_i0 PRJNA940501 15858 391 4.135057 16.16807287 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 141 4.2999999999999997e-38   NR XP_013760592.1 461836 g15043 i0 63.5 1.64194373401535 115 40 86.7 1 347 9 31 145 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 642 141 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27151198 27151198 PRJNA940501_S_NODE_27082_length_333_cov_4.031034_g26264_i0 PRJNA940501 27082 333 4.031034 13.42334322 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 43.1 0.0326   NR XP_013758370.1 461836 g26264 i0 55.9 0.306306306306306 34 15 30.6 0 332 231 108 141 XP_013758370.1 uncharacterized protein AMSG_04698 [Thecamonas trahens ATCC 50062] diamond 102 43.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27657278 27657278 PRJNA940501_S_NODE_60644_length_271_cov_2.267544_g59826_i0 PRJNA940501 60644 271 2.267544 6.14504424 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 53.1 1.17e-5   NR XP_013762071.1 461836 g59826 i0 38 0.553505535055351 50 31 55.4 0 243 94 1062 1111 XP_013762071.1 tumor necrosis factor receptor superfamily member 6B [Thecamonas trahens ATCC 50062] diamond 150 53.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27720681 27720681 PRJNA940501_S_NODE_224564_length_185_cov_2.788732_g223746_i0 PRJNA940501 224564 185 2.788732 5.1591542 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 45.4 0.00193   NR XP_013756972.1 461836 g223746 i0 40 0.972972972972973 60 33 92.4 1 171 1 548 607 XP_013756972.1 cold-induced protein [Thecamonas trahens ATCC 50062] diamond 180 45.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27972816 27972816 PRJNA940501_S_NODE_281405_length_171_cov_1.757812_g280587_i0 PRJNA940501 281405 171 1.757812 3.00585852 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 85.5 1.18e-17   NR XP_013757543.1 461836 g280587 i0 66.1 0.982456140350877 56 19 98.2 0 170 3 453 508 XP_013757543.1 Ca2:Cation Antiporter family [Thecamonas trahens ATCC 50062] diamond 168 85.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28541308 28541308 PRJNA940501_S_NODE_132787_length_219_cov_2.335227_g131969_i0 PRJNA940501 132787 219 2.335227 5.11414713 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 63.5 1.25e-9   NR XP_013753526.1 461836 g131969 i0 44.3 0.958904109589041 70 38 95.9 1 2 211 574 642 XP_013753526.1 uncharacterized protein AMSG_12362 [Thecamonas trahens ATCC 50062] diamond 210 63.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31036575 31036575 PRJNA940501_S_NODE_3675_length_904_cov_2.277584_g3272_i0 PRJNA940501 3675 904 2.277584 20.58935936 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 61.6 5.59e-7   NR XP_013755466.1 461836 g3272 i0 25.4 1.71902654867257 173 114 54.1 5 699 211 61 228 XP_013755466.1 uncharacterized protein AMSG_08401 [Thecamonas trahens ATCC 50062] diamond 1554 61.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;