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contig_metadata

29 rows where bioproject = "PRJNA940501", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 29 ✖

tax_clade 1

  • Amoebozoa · 29 ✖

bioproject 1

  • PRJNA940501 · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2196715 2196715 PRJNA940501_S_NODE_43162_length_295_cov_9.638889_g42344_i0 PRJNA940501 43162 295 9.638889 28.43472255 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 111 4.45e-20   NTclustered gi|470459156|ref|XM_004341277.1| 1257118 g42344 i0 92.308 6.76271186440678 78 6 26 0 27 104 1089 1166 Acanthamoeba castellanii str. Neff ribosomal protein L3, putative (ACA1_264110), partial mRNA blastn 1995 111 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
3470854 3470854 PRJNA940501_S_NODE_271083_length_173_cov_5.100000_g270265_i0 PRJNA940501 271083 173 5.1 8.823 Vannella septentrionalis 197531 Discosea other_Eukaryota 281 1.7e-71   NTclustered gi|300078499|gb|GU001161.1| 197531 g270265 i0 95.954 16.6531791907514 173 7 100 0 1 173 1109 937 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 2881 281 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
11122232 11122232 PRJNA940501_S_NODE_172649_length_202_cov_2.069182_g171831_i0 PRJNA940501 172649 202 2.069182 4.17974764 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 126 1.38e-33   NR XP_004338439.1 1257118 g171831 i0 83.3 3.92079207920792 66 11 98 0 3 200 195 260 XP_004338439.1 protein phosphatase 6, catalytic subunit isoform a, putative [Acanthamoeba castellanii str. Neff] diamond 792 126 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14950114 14950114 PRJNA940501_S_NODE_8832_length_495_cov_18.805310_g8051_i0 PRJNA940501 8832 495 18.80531 93.0862845 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 200 1.63e-46   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g8051 i0 79.054 9.41818181818182 296 58 59 4 3 296 229 522 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 4662 200 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21319599 21319599 PRJNA940501_S_NODE_10557_length_457_cov_10.429952_g9759_i0 PRJNA940501 10557 457 10.429952 47.66488064 Vannellidae sp. 2491907 Discosea other_Eukaryota 226 2.4699999999999993e-54   NTclustered gi|1523769315|gb|MH535957.1| 2491907 g9759 i0 80.769 39.6542669584245 312 41 67 14 112 419 699 403 Vannellidae sp. strain 151-1SVA_C2 18S ribosomal RNA gene, partial sequence; mitochondrial blastn 18122 226 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae   Vannellidae sp.
21320387 21320387 PRJNA940501_S_NODE_15377_length_395_cov_8.139205_g14563_i0 PRJNA940501 15377 395 8.139205 32.14985975 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 189 2.7599999999999998e-43   NTclustered gi|470442906|ref|XM_004339540.1| 1257118 g14563 i0 79.211 18.2 279 52 70 5 3 278 43 318 Acanthamoeba castellanii str. Neff 60S ribosomal protein, putative (ACA1_063390), partial mRNA blastn 7189 189 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22596201 22596201 PRJNA940501_S_NODE_218518_length_187_cov_1.812500_g217700_i0 PRJNA940501 218518 187 1.8125 3.389375 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 207 3.23e-49   NTclustered gi|470455615|ref|XM_004340928.1| 1257118 g217700 i0 86.631 8.19786096256684 187 25 100 0 1 187 369 183 Acanthamoeba castellanii str. Neff ribosomal protein S23 (S12), putative (ACA1_232480), partial mRNA blastn 1533 207 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
23871183 23871183 PRJNA940501_S_NODE_182099_length_199_cov_1.320513_g181281_i0 PRJNA940501 182099 199 1.320513 2.62782087 Vannella septentrionalis 197531 Discosea other_Eukaryota 305 1.2e-78   NTclustered gi|300078499|gb|GU001161.1| 197531 g181281 i0 98.276 87.8643216080402 174 3 87 0 26 199 2274 2447 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17485 305 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
25145591 25145591 PRJNA940501_S_NODE_226200_length_185_cov_1.387324_g225382_i0 PRJNA940501 226200 185 1.387324 2.5665494 Vannella septentrionalis 197531 Discosea other_Eukaryota 309 8.49e-80   NTclustered gi|300078499|gb|GU001161.1| 197531 g225382 i0 96.757 1 185 6 100 0 1 185 1531 1347 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 185 309 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
26867188 26867188 PRJNA940501_S_NODE_196441_length_194_cov_1.556291_g195623_i0 PRJNA940501 196441 194 1.556291 3.01920454 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 54.7 1.91e-7   NR XP_004340136.1 1257118 g195623 i0 39.7 1.80927835051546 58 35 89.7 0 192 19 68 125 XP_004340136.1 actin related protein 2/3 complex, subunit 5like, putative [Acanthamoeba castellanii str. Neff] diamond 351 54.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26867221 26867221 PRJNA940501_S_NODE_58201_length_274_cov_2.238095_g57383_i0 PRJNA940501 58201 274 2.238095 6.1323803 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 52.8 1.6e-5   NR XP_004341024.1 1257118 g57383 i0 38.5 0.711678832116788 65 40 71.2 0 264 70 499 563 XP_004341024.1 Ser/Thr phosphatase family superfamily protein [Acanthamoeba castellanii str. Neff] diamond 195 52.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27183015 27183015 PRJNA940501_S_NODE_15562_length_394_cov_1.740741_g14748_i0 PRJNA940501 15562 394 1.740741 6.85851954 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 113 3.1200000000000003e-26   NR XP_004344035.1 1257118 g14748 i0 59.4 0.769035532994924 101 40 76.9 1 392 90 599 698 XP_004344035.1 TNF receptor-associated protein 1, putative [Acanthamoeba castellanii str. Neff] diamond 303 113 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27246451 27246451 PRJNA940501_S_NODE_51843_length_282_cov_2.556485_g51025_i0 PRJNA940501 51843 282 2.556485 7.2092877 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 46.6 3.38e-4   NR XP_004333525.1 1257118 g51025 i0 63.9 0.382978723404255 36 13 38.3 0 268 161 12 47 XP_004333525.1 Actobindin, putative [Acanthamoeba castellanii str. Neff] diamond 108 46.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27720662 27720662 PRJNA940501_S_NODE_127884_length_222_cov_1.312849_g127066_i0 PRJNA940501 127884 222 1.312849 2.91452478 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 61.6 6.1e-9   NR XP_004368092.1 1257118 g127066 i0 54.2 2.67567567567568 48 22 64.9 0 33 176 477 524 XP_004368092.1 GTPase of unknown function subfamily protein [Acanthamoeba castellanii str. Neff] diamond 594 61.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27846369 27846369 PRJNA940501_S_NODE_297484_length_168_cov_1.128000_g296666_i0 PRJNA940501 297484 168 1.128 1.89504 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67.4 2.66e-11   NR XP_004341586.1 1257118 g296666 i0 50.9 0.946428571428571 53 26 94.6 0 4 162 344 396 XP_004341586.1 elongation factor 1-gamma family protein [Acanthamoeba castellanii str. Neff] diamond 159 67.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27916343 27916343 PRJNA940501_S_NODE_381445_length_152_cov_1.293578_g380627_i0 PRJNA940501 381445 152 1.293578 1.96623856 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 62.8 2.34e-11   NR XP_004352072.1 1257118 g380627 i0 58.3 2.84210526315789 48 20 94.7 0 144 1 11 58 XP_004352072.1 uncharacterized protein ACA1_036220 [Acanthamoeba castellanii str. Neff] diamond 432 62.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28099028 28099028 PRJNA940501_S_NODE_319465_length_163_cov_1.808333_g318647_i0 PRJNA940501 319465 163 1.808333 2.94758279 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 41.2 0.0456   NR XP_004337872.1 1257118 g318647 i0 44.1 0.625766871165644 34 19 62.6 0 160 59 777 810 XP_004337872.1 uncharacterized protein ACA1_187460 [Acanthamoeba castellanii str. Neff] diamond 102 41.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28541360 28541360 PRJNA940501_S_NODE_37587_length_306_cov_1.768061_g36769_i0 PRJNA940501 37587 306 1.768061 5.41026666 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 91.7 2.53e-19   NR XP_004353773.1 1257118 g36769 i0 61.2 0.656862745098039 67 26 65.7 0 8 208 317 383 XP_004353773.1 uncharacterized protein ACA1_272680 [Acanthamoeba castellanii str. Neff] diamond 201 91.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29053298 29053298 PRJNA940501_S_NODE_16908_length_383_cov_2.523529_g16092_i0 PRJNA940501 16908 383 2.523529 9.66511607 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 148 4.05e-43   NR XP_004333102.1 1257118 g16092 i0 67.3 18.3289817232376 101 33 79.1 0 371 69 32 132 XP_004333102.1 ribosomal protein L32, putative [Acanthamoeba castellanii str. Neff] diamond 7020 148 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29141282 29141282 PRJNA940501_S_NODE_53109_length_280_cov_4.518987_g52291_i0 PRJNA940501 53109 280 4.518987 12.6531636 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.9 2.32e-15   NR XP_004351562.1 1257118 g52291 i0 58.7 0.675 63 26 67.5 0 279 91 796 858 XP_004351562.1 elongation factor Tu GTP binding domain containing protein [Acanthamoeba castellanii str. Neff] diamond 189 80.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29804034 29804034 PRJNA940501_S_NODE_92751_length_243_cov_1.575000_g91933_i0 PRJNA940501 92751 243 1.575 3.82725 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 55.8 8.56e-7   NR XP_004339798.1 1257118 g91933 i0 89.7 1.07407407407407 29 3 35.8 0 2 88 402 430 XP_004339798.1 acetylCoA acyltransferase, putative [Acanthamoeba castellanii str. Neff] diamond 261 55.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30499167 30499167 PRJNA940501_S_NODE_213313_length_189_cov_1.239726_g212495_i0 PRJNA940501 213313 189 1.239726 2.34308214 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 80.5 7.09e-16   NR XP_004348579.1 1257118 g212495 i0 58.9 0.888888888888889 56 22 88.9 1 19 186 284 338 XP_004348579.1 uncharacterized protein ACA1_159190 [Acanthamoeba castellanii str. Neff] diamond 168 80.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30625347 30625347 PRJNA940501_S_NODE_218093_length_187_cov_2.159722_g217275_i0 PRJNA940501 218093 187 2.159722 4.03868014 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 68.6 1.77e-12   NR XP_004367486.1 1257118 g217275 i0 50.8 0.946524064171123 59 29 94.7 0 4 180 91 149 XP_004367486.1 succinate dehydrogenase, cytochrome b556 subunit protein [Acanthamoeba castellanii str. Neff] diamond 177 68.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30752019 30752019 PRJNA940501_S_NODE_73914_length_258_cov_1.530233_g73096_i0 PRJNA940501 73914 258 1.530233 3.94800114 Paramoeba perurans 437603 Discosea other_Eukaryota 96.3 2.11e-22   NR WQA41799.1 437603 g73096 i0 67.2 0.709302325581395 61 20 70.9 0 5 187 157 217 WQA41799.1 cysteine peroxiredoxin [Paramoeba perurans] diamond 183 96.3 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
31225695 31225695 PRJNA940501_S_NODE_162175_length_206_cov_2.018405_g161357_i0 PRJNA940501 162175 206 2.018405 4.1579143 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 87.8 2.6e-20   NR XP_004348720.1 1257118 g161357 i0 63.2 0.990291262135922 68 25 99 0 205 2 58 125 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 204 87.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31605486 31605486 PRJNA940501_S_NODE_272036_length_173_cov_1.969231_g271218_i0 PRJNA940501 272036 173 1.969231 3.40676963 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 65.5 1.1e-10   NR XP_004341750.1 1257118 g271218 i0 71.8 1.35260115606936 39 11 67.6 0 169 53 280 318 XP_004341750.1 TolAlike protein [Acanthamoeba castellanii str. Neff] diamond 234 65.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31700321 31700321 PRJNA940501_S_NODE_21277_length_357_cov_1.522293_g20459_i0 PRJNA940501 21277 357 1.522293 5.43458601 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 75.9 2.05e-13   NR XP_004333334.1 1257118 g20459 i0 50.8 0.529411764705882 63 31 52.9 0 3 191 275 337 XP_004333334.1 Synapsin, ATP binding domain containing protein [Acanthamoeba castellanii str. Neff] diamond 189 75.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31700324 31700324 PRJNA940501_S_NODE_226337_length_185_cov_1.323944_g225519_i0 PRJNA940501 226337 185 1.323944 2.4492964 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 57 1.59e-7   NR XP_004348480.1 1257118 g225519 i0 57.6 0.956756756756757 59 24 94.1 1 10 183 49 107 XP_004348480.1 Prokumamolisin, activation domain containing protein [Acanthamoeba castellanii str. Neff] diamond 177 57 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32711975 32711975 PRJNA940501_S_NODE_170200_length_203_cov_1.762500_g169382_i0 PRJNA940501 170200 203 1.7625 3.577875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 53.9 1.43e-6   NR XP_004333619.1 1257118 g169382 i0 40 1.6256157635468 55 33 81.3 0 3 167 155 209 XP_004333619.1 vesicle trafficking protein, putative [Acanthamoeba castellanii str. Neff] diamond 330 53.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;