RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA939415", tax_phylum = "Preplasmiviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

  • Preplasmiviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA939415 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5084970 5084970 PRJNA939415_P_NODE_72044_length_262_cov_1.455026_g71622_i0 PRJNA939415 72044 262 1.455026 3.81216812 root 1 Root_unresolved Root_unresolved 484 1.99e-132   NTclustered gi|2616465679|gb|OR735196.1| 10515 g71622 i0 100 100 262 0 100 0 1 262 3575 3836 Human adenovirus 2 isolate HAdV-C2/USA/11A6/2013, complete genome blastn 26200 484 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
8909089 8909089 PRJNA939415_P_NODE_11807_length_450_cov_5.297082_g11388_i0 PRJNA939415 11807 450 5.297082 23.836869 root 1 Root_unresolved Root_unresolved 822 0   NTclustered gi|2620236085|gb|OR777220.1| 10515 g11388 i0 100 98.8888888888889 445 0 99 0 6 450 15173 14729 Human adenovirus 2 isolate HAdV-C2/USA/13R1/2017, complete genome blastn 44500 822 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
11460018 11460018 PRJNA939415_P_NODE_110629_length_203_cov_16.884615_g110207_i0 PRJNA939415 110629 203 16.884615 34.27576845 root 1 Root_unresolved Root_unresolved 263 7.51e-66   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g110207 i0 98.658 73.3990147783251 149 1 73 1 1 148 11551 11403 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 14900 263 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
14010227 14010227 PRJNA939415_P_NODE_110451_length_204_cov_6.648855_g110029_i0 PRJNA939415 110451 204 6.648855 13.5636642 root 1 Root_unresolved Root_unresolved 276 9.7e-70   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g110029 i0 100 92.3333333333333 149 0 93 0 56 204 28490 28638 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 18836 276 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;