RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA939415" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA939415 · 9 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21317826 21317826 PRJNA939415_P_NODE_54977_length_278_cov_8.809756_g54555_i0 PRJNA939415 54977 278 8.809756 24.49112168 Fimicolochytrium jonesii 1396493 Fungi Fungi 70.5 9.78e-12   NR XP_052923883.1 1396493 g54555 i0 77.5 3.02158273381295 40 9 43.2 0 230 111 542 581 XP_052923883.1 carboxyl transferase [Fimicolochytrium jonesii] diamond 840 70.5 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
26644928 26644928 PRJNA939415_P_NODE_103561_length_229_cov_3.717949_g103139_i0 PRJNA939415 103561 229 3.717949 8.51410321 Hyaloraphidium curvatum 82268 Fungi Fungi 51.2 3.15e-5   NR KAI9020636.1 82268 g103139 i0 48 1.31004366812227 50 26 65.5 0 72 221 703 752 KAI9020636.1 hypothetical protein DFJ74DRAFT_133295 [Hyaloraphidium curvatum] diamond 300 51.2 1 Eukaryota Opisthokonta Fungi Chytridiomycota Monoblepharidomycetes Monoblepharidales   Hyaloraphidium Hyaloraphidium curvatum
27562028 27562028 PRJNA939415_P_NODE_92904_length_243_cov_1.858824_g92482_i0 PRJNA939415 92904 243 1.858824 4.51694232 Polyrhizophydium stewartii 2732419 Fungi Fungi 101 1.33e-25   NR KAL2916487.1 2732419 g92482 i0 63 2 81 28 100 1 1 243 36 114 KAL2916487.1 60S ribosomal protein L26A [Polyrhizophydium stewartii] diamond 486 101 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Polyrhizophydium Polyrhizophydium stewartii
28200437 28200437 PRJNA939415_P_NODE_76746_length_257_cov_2.793478_g76324_i0 PRJNA939415 76746 257 2.793478 7.17923846 Chytridiomycetes 451435 Fungi Fungi 49.7 1.58e-4   NR KAJ3200481.1 109932 g76324 i0 81.5 0.630350194552529 27 5 31.5 0 1 81 82 108 KAJ3200481.1 hypothetical protein HDU82_008884 [Entophlyctis luteolus] diamond 162 49.7 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Entophlyctis Entophlyctis luteolus
29211181 29211181 PRJNA939415_P_NODE_48409_length_285_cov_2.518868_g47987_i0 PRJNA939415 48409 285 2.518868 7.1787738 Batrachochytrium 100474 Fungi Fungi 55.1 3.01e-6   NR KAJ8325987.1 109871 g47987 i0 34.1 8.4 88 50 89.5 2 31 285 1397 1479 KAJ8325987.1 hypothetical protein O5D80_005628 [Batrachochytrium dendrobatidis] diamond 2394 55.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Batrachochytrium Batrachochytrium dendrobatidis
29937342 29937342 PRJNA939415_P_NODE_44371_length_289_cov_2.365741_g43949_i0 PRJNA939415 44371 289 2.365741 6.83699149 Eukaryota 2759 Fungi Fungi 97.4 4.08e-21   NR XP_052965557.1 110093 g43949 i0 81.1 14.3044982698962 53 10 55 0 2 160 1127 1179 XP_052965557.1 armadillo-type protein [Polychytrium aggregatum] diamond 4134 97.8 0.995910020449898 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
29961927 29961927 PRJNA939415_P_NODE_61351_length_272_cov_3.341709_g60929_i0 PRJNA939415 61351 272 3.341709 9.08944848 Polyrhizophydium stewartii 2732419 Fungi Fungi 55.8 1.31e-6   NR KAL2914157.1 2732419 g60929 i0 53.7 0.452205882352941 41 19 45.2 0 59 181 61 101 KAL2914157.1 hypothetical protein HK105_206415 [Polyrhizophydium stewartii] diamond 123 55.8 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Rhizophydiales   Polyrhizophydium Polyrhizophydium stewartii
30056606 30056606 PRJNA939415_P_NODE_82211_length_251_cov_7.561798_g81789_i0 PRJNA939415 82211 251 7.561798 18.98011298 Geranomyces variabilis 109894 Fungi Fungi 77.4 2.56e-14   NR KAJ3167454.1 109894 g81789 i0 53.5 0.848605577689243 71 32 84.9 1 37 249 462 531 KAJ3167454.1 hypothetical protein HDU88_002376 [Geranomyces variabilis] diamond 213 77.4 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Geranomyces Geranomyces variabilis
30790290 30790290 PRJNA939415_P_NODE_43674_length_290_cov_1.364055_g43252_i0 PRJNA939415 43674 290 1.364055 3.9557595 Eukaryota 2759 Fungi Fungi 54.3 5.36e-6   NR OUM68194.1 73868 g43252 i0 32.9 4.3448275862069 85 55 87.9 1 268 14 212 294 OUM68194.1 hypothetical protein PIROE2DRAFT_58263 [Piromyces sp. E2] diamond 1260 54.7 0.992687385740402 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Piromyces Piromyces sp. E2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;