RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA939415" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA939415 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27846279 27846279 PRJNA939415_P_NODE_65184_length_268_cov_4.476923_g64762_i0 PRJNA939415 65184 268 4.476923 11.99815364 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 70.5 9e-12   NR MFC1694251.1 2053570 g64762 i0 40.5 0.940298507462687 84 50 94 0 265 14 98 181 MFC1694251.1 YfhO family protein [Candidatus Latescibacterota bacterium] diamond 252 70.5 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
28421849 28421849 PRJNA939415_P_NODE_6046_length_754_cov_4.173275_g5646_i0 PRJNA939415 6046 754 4.173275 31.4664935 Pseudomonadati 3379134 Bacteria Bacteria 180 1.88e-51   NR MBN1294234.1 2053570 g5646 i0 65.9 4.43236074270557 123 42 48.9 0 754 386 179 301 MBN1294234.1 hypothetical protein [Candidatus Latescibacterota bacterium] diamond 3342 181 0.994475138121547 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
30783378 30783378 PRJNA939415_P_NODE_44414_length_289_cov_2.240741_g43992_i0 PRJNA939415 44414 289 2.240741 6.47574149 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 44.3 0.0161   NR MDP6776342.1 2053570 g43992 i0 42.3 0.809688581314879 78 37 78.9 3 17 244 166 237 MDP6776342.1 indole-3-glycerol phosphate synthase TrpC [Candidatus Latescibacterota bacterium] diamond 234 44.3 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;