RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA939415", tax_kingdom = "Pararnavirae" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 3 ✖

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 3 ✖

bioproject 1

  • PRJNA939415 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12394785 12394785 PRJNA939415_P_NODE_4850_length_956_cov_2.955832_g4477_i0 PRJNA939415 4850 956 2.955832 28.25775392 Moloney murine leukemia virus 11801 Viruses Viruses 641 4.46e-214   NR NP_057933.2 11801 g4477 i0 99.7 7.80439330543933 311 1 97.6 0 935 3 658 968 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 7461 641 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
16219318 16219318 PRJNA939415_P_NODE_8913_length_537_cov_5.349138_g8496_i0 PRJNA939415 8913 537 5.349138 28.72487106 Moloney murine leukemia virus 11801 Viruses Viruses 367 3.14e-114   NR NP_057933.2 11801 g8496 i0 99.4 2.98324022346369 178 1 99.4 0 3 536 1017 1194 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 1602 367 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
23868989 23868989 PRJNA939415_P_NODE_99899_length_235_cov_2.438272_g99477_i0 PRJNA939415 99899 235 2.438272 5.7299392 Gammaretrovirus 153135 Viruses Viruses 146 1.39e-38   NR ABU54795.1 11786 g99477 i0 97.4 14.936170212766 78 2 99.6 0 1 234 1212 1289 ABU54795.1 gag-pro-pol polyprotein [Murine leukemia virus] diamond 3510 146 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;